Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01157 ATGGACTTTGTGAAGAAGTGGAAGAGAGTATTGGGAAGCAGCAAGAGATTGCATCCAGAGAACAGTGGAAGTGGAAGCTACGGCAGATTGAGAAACAGACAGAAGAAGAAGGCTGGTGTGGCTCCACATGGTTGTCTTTGTGTCTACGTCGGAGCCGAGAGAGAGAGATTCATAATCAAGATCAAGATGGCGAACCACCCACTGTTCAAAGCGCTTTTGGAAGGTGCTGAGAGAGAATATGGGTATAGAAACGATGGTCCACTGTGGCTCCCTTGCCACGTTGATTTGTTCTGTGAGGCTCTGGAGGAGATGGAAATCGGCACCGAAGAAGATGGCATGGGTTCTGTGGGTTGCGTGGGTCATAGTTACAGGCACAACCCATCTTCAGTTTCTAACCTCAGTTGTAGATATGTCGCAGGGTCTTTCATTGATCGTTACCAAACCCTTGTTATTCAAGGATATACAAAATGA 471 0.4692 MDFVKKWKRVLGSSKRLHPENSGSGSYGRLRNRQKKKAGVAPHGCLCVYVGAERERFIIKIKMANHPLFKALLEGAEREYGYRNDGPLWLPCHVDLFCEALEEMEIGTEEDGMGSVGCVGHSYRHNPSSVSNLSCRYVAGSFIDRYQTLVIQGYTK 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01157 156 MobiDBLite consensus disorder prediction 15 35 - -
Spst3g01157 156 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 33 99 IPR003676 GO:0009733
Spst3g01157 156 Pfam Auxin responsive protein 5 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01157 Spst-Chr3 14974767 14975237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01157 41 97 Calmodulin-binding Proteins AT3G43120 52.632 3.23e-14 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01157 K14488 - gmx:102667331 201.06