Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01156 ATGGCAAATAAACTGAAAGTGAGGCAAGGAGAACCAACTCTGGTGCCACCTGCAGAAGAAACGAAAAAGGGTCTCTACTTCCTTTCAAACCTTGACCAGAACATAGCACATCAAGTTCGCACAGTTTACTTTTATAAGTCTGCATGTAGAGGCAACGAGGATGCAGCACAAGTCATCAAGGATTCTTTGTCCAAGGTTCTTGTTCACTATTACCCTATGGCTGGCAGGTTAGTCATCAGTTCCGAAGGGAAACTTATTGTGGATTGCACAGGTGAGGGTGCTGTGTTTGTTGAGGCTGAAGCAAACTGTGTGGTAGAGGACTTGGGGGATTTGACAGAGACTGACCTTGAAACTCTTGGGAAAGTGGTTTATGATATCCCTGGTGCAACCAACATACTTGAGATACCTCCTTTGCTTGTTCAGGTAACAAAGTTCAAATGTGGAGGATTTGTTTTGGGGGTAAACATGAACCATTGCATGACTGATGGTATAAGTGCGATGGAATTTGTGAACTCATGGGGAGAGACAGCAAGAGGGTTGGACTTGAGCGTTTCACCATTTCTAGACCGAACAATACAAGGAGCACGAAACCCTCCCAAAATAGAGTTTCCACACCACGAGTTTGATGAAATTGAAGATATATCAGATGACAGAAAACTCTACGAGGAAGAGATCCTCTACAGGTCCTTCAACTTCGACCCAGATAAGCTTGAACTGCTTAAGAAAAGAGCCACAGAAGATGGTGTTGTGAAGAAGTGCTCCACTTTTGAAGCACTCACAGCTTTTGTGTGGAGAGCTAGAACTGAAGCATTGGGGATGCACCCTAATCAACAAACGAAGCTACTTTTTGCTGTTGATGGAAGGTTCAGGTTCGTGCCTCCAACACCAAAGGGGTACTTTGGAAATGCCATTGTGTTGTCCAATGCTATATGCAAGGTAGGGGAATTGCTGGATAAGCCACTGTCACACACTGTTGGATTGATTGGCAAGGCAATTGACATGGTCACAGACAGTTACATGAGATCCGCTATTGATTATTTTGAAGTCAAAAAAGCAAAGCCTTCGTTAACAGGAAGCCTTGTGATCACAACATGGACTAGGATACCTTTCAACACTGCAGATTTCGGATGGGGAAAGCCCTTTTTTTTCGGCCCTGTAACCCTTCCAGGAAAGGAAGTCATTTTGTTCTTATCACCCAACAATGAAGAAACAAAAGGCATAAACGTGCTACTTGGTTTGCCATCTTCTGTCATGAAAACGTTTGAAGCACTGATGGAGATCGATATGAATTAA 1293 0.4354 MANKLKVRQGEPTLVPPAEETKKGLYFLSNLDQNIAHQVRTVYFYKSACRGNEDAAQVIKDSLSKVLVHYYPMAGRLVISSEGKLIVDCTGEGAVFVEAEANCVVEDLGDLTETDLETLGKVVYDIPGATNILEIPPLLVQVTKFKCGGFVLGVNMNHCMTDGISAMEFVNSWGETARGLDLSVSPFLDRTIQGARNPPKIEFPHHEFDEIEDISDDRKLYEEEILYRSFNFDPDKLELLKKRATEDGVVKKCSTFEALTAFVWRARTEALGMHPNQQTKLLFAVDGRFRFVPPTPKGYFGNAIVLSNAICKVGELLDKPLSHTVGLIGKAIDMVTDSYMRSAIDYFEVKKAKPSLTGSLVITTWTRIPFNTADFGWGKPFFFGPVTLPGKEVILFLSPNNEETKGINVLLGLPSSVMKTFEALMEIDMN 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01156 430 Gene3D - 212 426 IPR023213 -
Spst3g01156 430 Pfam Transferase family 7 426 - -
Spst3g01156 430 FunFam Tryptamine hydroxycinnamoyl transferase 212 426 - -
Spst3g01156 430 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 423 - -
Spst3g01156 430 Gene3D - 1 210 IPR023213 -
Spst3g01156 430 FunFam Spermidine hydroxycinnamoyl transferase 5 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01156 Spst-Chr3 14970628 14972392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01156 5 425 Monolignol Biosynthesis Gene Families AT5G48930 38.106 3.79e-96 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01156 K15400 - gmx:100527026 707.212