Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01148 ATGTCGGAATCTCGCCCCTCTAAACGCCCCAAAACCACCAGGGGGGACGATGATTATATGCCAGGAAATATTCTTGAGATCGAGCTTTGTAATTTCATGACGTTTGATTACTTAAAATGCAAACCTGGGCCTCGATTGAATCTTGTAATTGGGCCCAATGGTTCTGGTAAGAGTTCGCTTGTATGTGCTATTGCTCTTGGCCTCTGCGGAGAGCCCCAGTTGCTTGGGCGTGCTACAAGTATTGGGGCATATGTGAAGCGTGGAGAAGAATCTGGCTACATTAAGATCACCTTGAGGGGGGTCCATAAAGAGGAACACATTATCATCATGCGGAAAATTAATACTAATAACAAGTCTGAATGGTTGTTCAATGGAAATGTAGTGTCTAAAAAGGATGTGGTTGAAACCATTCAAAGGTTTAACATACAAGTCAATAATTTGACTCAGTTTTTACCGCAAGACAGGGTCTGTGAGTTCGCGAAGTTAACTCCTGTTCAACTTCTGGAAGAGACAGAAAAGGCTGTTGGTGATCCACAGCTTCCAGAGCAACATCGAACACTAGTTGATAAAAGTCGGTCATTGAAGCATATTGAGTTGTCTCTGGAGAAAAATGAAGGAACCTTACAACAATTGAAGGAACGAAATGCTGAATTAGAGACGGATGTTGAACGTGTTCGTCAAAGAGATGAACTTCTTACCAAGGCTGAAGCAATGAAAAAGAAGTTACCATGGCTGAGGTATGATATGAAGCAGGCAGAATACCGGGAAGCTAAGGAACGTGAGAATGATGCAGCAAAGGCATTGGAGGAAGCTGCAAAGTTATTAAATGATCTTAAAGAACCCATTATGAAACAAAAGGAAGAGAAGACTGCATTAGATGTAAAATGCAAAAAGGTTAGCCGCAATGTAAATGAGAATGCAAAGAAAAGAAATGAACTTATGGAGGAGGAGAACAAATTGGACGTGGAATTACAAGGAAAATACAAAGAAATGAAAGAATTGAGGAGACAGGAAGAAACTCGACAACAAAAACTTGTAAAAGCAAGGGAGGAACTTGCTATTGCTGAACTTGAACTTGAGAATCTACCCCCTTATGTACCTCCTAAGGATGAGCTTCAAAGACTAAAAGCCGAAATTGGAGAATTGGATTATTCTGCTAATCAAGTGAGGCAGAATAAGTCACAAGCAGAAAATGAAATAAAGCGGAAGAAGTCATCCATGATGCAGAATAAAGAGAGGTTGATGGAAATGGATAATAAAAGTACAAAGTGTTTGCATGTATTGCAAAGGTCAGGGGCTGAAAAAATTTTTGAAGCGTATAAATGGGTCCAAGAACATAGGCACGAATTCAATAAGGAGGTTTATGGCCCAGTTTTAGTAGAGGTGAATGTATCAAATAAGGTTCATGCTGCATATCTAGAGGGTCAAGTGGCTCACTACACTTGGAAGTCCTTCATAACGCAAGATTCTGGTGATAGAGATCTTTTGGTGAAACACCTGCAGTTCTTTGATGTACCAGTTTTAAATTATACTGGTGATGATTGCCACCAAAGAGAGCCTTTTCAAATTTCTGAAGATAAGCGAGCTCTTGGCATATACTCCCGTCTGGATCAAATTTTTGATGCTCCTATTGCTGTGAAGGAGGTTTTGATTAGCCAGTTTAGTCTAGATAATTCATACATTGGATCAAAAGAAACTGATCAGAAAGCTGATGAGGTCCCGAAATTGGGAATTATAGATTTGTGGACACCTGAAAATCACTACCATTGGTCCAAGTCTAGATACGGAAATCATGTCGTTACAGTTGTTCAACAAGTGGAACGCCCACAACTTTTATTGAACAATTTGAATGTTGGTGAAATTGAGAAGCTGCGTTCCCAGCAAAAGGAGCTTGAAGAAGTCATTGCTAATTTGGAGGAATGTGTTAAAAGGTTTCAAGATGAAGAAAGAAGCCTAGTGAATCAAGCTGCTAATCTTCGTAAGCAGTGGGAGGGCATTAGTATTACGGTGCAGAATGAGCATAAAAAACGTCAATCAATCAGTAGCCGAATTGGTGAGTAG 2061 0.4008 MSESRPSKRPKTTRGDDDYMPGNILEIELCNFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCAIALGLCGEPQLLGRATSIGAYVKRGEESGYIKITLRGVHKEEHIIIMRKINTNNKSEWLFNGNVVSKKDVVETIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPEQHRTLVDKSRSLKHIELSLEKNEGTLQQLKERNAELETDVERVRQRDELLTKAEAMKKKLPWLRYDMKQAEYREAKERENDAAKALEEAAKLLNDLKEPIMKQKEEKTALDVKCKKVSRNVNENAKKRNELMEEENKLDVELQGKYKEMKELRRQEETRQQKLVKAREELAIAELELENLPPYVPPKDELQRLKAEIGELDYSANQVRQNKSQAENEIKRKKSSMMQNKERLMEMDNKSTKCLHVLQRSGAEKIFEAYKWVQEHRHEFNKEVYGPVLVEVNVSNKVHAAYLEGQVAHYTWKSFITQDSGDRDLLVKHLQFFDVPVLNYTGDDCHQREPFQISEDKRALGIYSRLDQIFDAPIAVKEVLISQFSLDNSYIGSKETDQKADEVPKLGIIDLWTPENHYHWSKSRYGNHVVTVVQQVERPQLLLNNLNVGEIEKLRSQQKELEEVIANLEECVKRFQDEERSLVNQAANLRKQWEGISITVQNEHKKRQSISSRIGE 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01148 686 Pfam RecF/RecN/SMC N terminal domain 25 147 IPR003395 -
Spst3g01148 686 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 1 684 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Spst3g01148 686 Gene3D - 23 232 IPR027417 -
Spst3g01148 686 Coils Coil 251 278 - -
Spst3g01148 686 Coils Coil 372 413 - -
Spst3g01148 686 Coils Coil 296 351 - -
Spst3g01148 686 Coils Coil 194 228 - -
Spst3g01148 686 Coils Coil 621 662 - -
Spst3g01148 686 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 287 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01148 1 683 Structural Maintenance of Chromosomes family AT5G15920 60.761 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01148 K22803 - gmx:100778678 1187.94