Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01147 ATGGAGGAGCGGGATGATCTAGATACTGAGATAGCAAAGCTTGTTCATCAGGCTGCCAAGTATAACATTCAGCGTTTCCATAATGCAATGGAAATTAAGGATCTTCTTGTTGAAGCTGTGAGTTACAGACGAATTTTTATTGAACAACGTATGGCTTTCATTGAATTTGATGCAAAGATTGGAGAAATGGATGCCAATCTGAAGCAGCATGAGAATTTGGCCCTGCAAGCATCATTGCAATTAGAAAACTGTAAGAAAGAATCTGAAAATTGTAGACAGAAGCTTGCAGATTCCTTGAAGTATGCTAAATCAATTGCTCGGCTTACACCTGAGTTAAAAAAGGAATTTCTTGAGATGCCTACTACAATTGAAGAACTGGAGGCAGCTATCCAGGATACTACTTCTCAAGCCAATTCAATTCTCTTTGTCAATCATAACATATTGGAACAATATAAAGATCGTGAACGACAGATAGAAGATCTTGCGGCAAAACTGGAAGCAGACAAAAAGGAATCTGCTAGGTGTTTGGCTGAATTAAATTACATTAAGGGAAAATGGCTTCCAACATTGAGAAACCTTGTGGCAAAGATAAATGAAACTTTTAGTTTTAATTTCCAAGAGATGGCCGTTGCTGGAGAAGTTTCACTAGATGAGCATGATATAGATTTTGATCAATATGGAATACTTATAAAAGTTAAATTCAGAGAAAATGGACATCTTCAGGCTTTGAGTGCCCATCGTCAATCTGGAGGGGAGCGATCAGTTTCAACTATTGTTTATCTTGTTTCCCTTCAAGATCTGACAAACTGCCCATTTAGAGTTGTTGATGAGATAAACCAAGCTCTCTACAGACGGTCTTTGACTGTGTTTTTATCAGGAATGGACCCAATCAATGAAAGGAAGATGTTTCAGCAATTAGTGAGAGCAGCAAGCAAGCCAAATACACCCCAGTGTTTCTTACTTACCCCGAAATTGTTACCAGATCTGCAATATAGTGAGGCATGCAGTATATTGAATGTCATGAATGGCCCTTGGATTGAGCAACCCTCGAAGGTCTGGACTTCTGGTGATCGGTGGAGTATTGTCACGGGACTTGTTGGAGACACTCTTTGTTAA 1116 0.3916 MEERDDLDTEIAKLVHQAAKYNIQRFHNAMEIKDLLVEAVSYRRIFIEQRMAFIEFDAKIGEMDANLKQHENLALQASLQLENCKKESENCRQKLADSLKYAKSIARLTPELKKEFLEMPTTIEELEAAIQDTTSQANSILFVNHNILEQYKDRERQIEDLAAKLEADKKESARCLAELNYIKGKWLPTLRNLVAKINETFSFNFQEMAVAGEVSLDEHDIDFDQYGILIKVKFRENGHLQALSAHRQSGGERSVSTIVYLVSLQDLTNCPFRVVDEINQALYRRSLTVFLSGMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACSILNVMNGPWIEQPSKVWTSGDRWSIVTGLVGDTLC 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01147 371 Coils Coil 67 87 - -
Spst3g01147 371 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 312 IPR027417 -
Spst3g01147 371 Gene3D - 153 342 IPR027417 -
Spst3g01147 371 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 2 364 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Spst3g01147 371 Coils Coil 144 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01147 Spst-Chr3 14858623 14870953 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01147 1 360 Structural Maintenance of Chromosomes family AT5G15920 64.444 6.00e-163 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01147 K22803 - gmx:100778678 652.129