Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01143 ATGGAGAAACATCAAGTGTTGTCCACTATATACTCATCCTCCTCATCATCATCATCTGCTTCTGCTTCTGATTTTAACTCTGATGTTCATGGTGTGAAGAAAGGTGGTGGTGGTGGTGTTTTAAGAACTGAAAATGGAAGCGAGAAAGGTGGGAAAGAAATAAAGCGGCGGAGATATGCATTTGAAACAAGGAGTGAGGTTGATATACTGGACGATGGATACCGGTGGAGAAAGTACGGGGAAAAGTCCGTCAAAAACAATAAATTTCCAAGAAGTTATTACAGATGTTCTTATCGAGGTTGCAATGTGAAAAAACAAATCCAACGGCATGCAAAAGACGAAGAGATAGTGGTAACAACGTATGAAGGGTTACATTCTCATCCTGTGGAGAACTCAACAACCGAAAGTTTCGAGCAGATATTGTTGAGAAACCATCACATATACACCCTCACTCTATGA 459 0.4052 MEKHQVLSTIYSSSSSSSSASASDFNSDVHGVKKGGGGGVLRTENGSEKGGKEIKRRRYAFETRSEVDILDDGYRWRKYGEKSVKNNKFPRSYYRCSYRGCNVKKQIQRHAKDEEIVVTTYEGLHSHPVENSTTESFEQILLRNHHIYTLTL 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01143 152 MobiDBLite consensus disorder prediction 1 53 - -
Spst3g01143 152 MobiDBLite consensus disorder prediction 1 26 - -
Spst3g01143 152 Pfam WRKY DNA -binding domain 71 128 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g01143 152 FunFam WRKY transcription factor 57 56 130 - -
Spst3g01143 152 ProSiteProfiles WRKY domain profile. 65 130 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g01143 152 SUPERFAMILY WRKY DNA-binding domain 63 129 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst3g01143 152 SMART WRKY_cls 70 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g01143 152 Gene3D WRKY domain 57 123 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst3g01143 152 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 14 134 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01143 Spst-Chr3 14806499 14807056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01143 57 141 WRKY Transcription Factor Family AT5G13080 77.647 2.88e-47 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst3g01143 WRKY 3.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01143 - - gmx:100127378 211.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01143 3 14806499 14807056 Spst3g01143 3 14806499 14807056 ECH