Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01117 ATGAAGTTATGTACTTTATTGCTGTTGCTTGGTTTGGTTTCCGTGCTCTCTTTTGTGGCTTCTGTCTCGGTGCCTTCAAATGAAGTTTGGGCACTTCGAACGTTCAAAGAAGCTGTTTATGAAGATCCACACATGGTTTTGTCCAATTGGAATACTCTGGATTCAGATCCTTGTGACTGGAATGGTGTTTCTTGCACTGCACCGCGTGATCATGTGATCAAGCTTAACATATCAGGGGCTTCATTGAGGGGGTTTATTGCTCCAGAATTTGGGAAAATCACCTACTTACAAGAACTGATCTTACATGGCAACAATCTCATTGGAATAATACCTAAAGAATTGGGCATGATGAAATCTCTTAAGGTGTTGGATTTGGGAATGAATCAGTTATCTGGACCAATTCCTCTGGAGATTGGAAATTTAACCCAACTTATGAAAATAAACCTGCAGTCCAATGGGTTGACTGGTAGGCTACCTACGGAACTAGGAAATTTCAAATACCTTCAAGAGCTTCGGTTGGATAGGAATAGGCTTCAAGGATCTCTTCCTGGTGGTGGAAGTTCAAATTTTTCTTCAAATATGCATGGGATGTATGCCTCAGGTGTGAATTTAACTGGTTTCTGTCGTTCACCTCAGTTAAAAGTTGCAGATTTTTCATATAACTTTTTTGTTGGTAGCATACCCAAATGCTTGGAGTATCTCCCGAGATCAAGCTTTCAAGGAAATTGCCTTCATATCAAAGACATAAAACAGAGGACTTCGATGCAATGTGCTGGTGCTTCACCTGCTCAAAGCGGTCCAGTAGAGAACCCAAAGTCCCAACCTGCTACCAGACATGTGACCAAGCATCAAGAAGCATCTAAACCTTCTTGGCTTTTGGCTCTAGAAATAGTGACGGGAACCATGGTTGCTTCTCTCTTTGTTATTGCTATTTTCACTGCAATTCAGAAGTGTAACAACAAATCATCTATCATTATTCCATGGAAAAAATCTGGAAGTGGAAAAGATTATATGGCAATACATATAGACTCAGAGATGTTGAAGGATGTGATGAAGTATAGCAGACAGGACCTTGAAGTGGCCTGTGAAGACTTCAGCAACATAATTGGGTCCTCACCAGATAGTGTGGTGTACAAGGGTACAATGAAAGGTGGACCTGAGATTGCTGTAATTTCCCTCTGCATCAAGGAAGAGAATTGGACAGGATACCTTGAGCTCTATTTTCAAAGAGAGGTGGCAGACTTGGCAAGGTTAGATCATGATAACGCAGGAAAGCTGCTAGGATATTGTAGAGAGAGCAGTCCATTTACAAGGATGCTGGTTTTTGAATATGCATCAAACGGGACACTTTATGACCACCTACATTGTTATGGAGAAGGGTGCCAGTTGTCCTGGACAAGGCGTATGAAAATTATCATTGGCATTGCACGTGGGCTCAAGTATTTGCACACTGAAATTGAGCCTCCATTCACTATCTCAGAATTGAATTCCAATGCTGTTTACCTTACAGAAGACTTTTCCCCTAAGCTGGTGGATTTTGAAAGTTGGAAGACCATTCTTGAAAGATCAGAGAAAAATTCTGGTTCAGTTAGCAGCCAAGGTGCTGTTTGTGTTCTACCAAACTCCCTTGAAGCGCGCCATCTCGACCTCAAAGGGAACATATATGCTTTTGGTGTACTTCTACTGGAGATAACCAGTGGAAGACCTCCATACTGTAAGGACAAAGGGTACTTGGTGGATTGGGCCAGGGACTACCTTGAAATGCCAGAAGTAATGTCATATGTGGTGGCTCCTGAGTTGAAGCATTTTAGATATGAAGACCTCAAAGCAATATGTGAGGTGATAACTCTTTGCATCAGTCCTGATCCCTCTGTCCGTCCATCAATGCGTGAATTGTGCATCATGTTGGAGAGCAGAATAGACACATCCATAAATGTGGAGCTGAAGGCATCATCTCTGGCTTGGGCTGAGCTTGCCCTTTCTTCATAA 1989 0.4218 MKLCTLLLLLGLVSVLSFVASVSVPSNEVWALRTFKEAVYEDPHMVLSNWNTLDSDPCDWNGVSCTAPRDHVIKLNISGASLRGFIAPEFGKITYLQELILHGNNLIGIIPKELGMMKSLKVLDLGMNQLSGPIPLEIGNLTQLMKINLQSNGLTGRLPTELGNFKYLQELRLDRNRLQGSLPGGGSSNFSSNMHGMYASGVNLTGFCRSPQLKVADFSYNFFVGSIPKCLEYLPRSSFQGNCLHIKDIKQRTSMQCAGASPAQSGPVENPKSQPATRHVTKHQEASKPSWLLALEIVTGTMVASLFVIAIFTAIQKCNNKSSIIIPWKKSGSGKDYMAIHIDSEMLKDVMKYSRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEENWTGYLELYFQREVADLARLDHDNAGKLLGYCRESSPFTRMLVFEYASNGTLYDHLHCYGEGCQLSWTRRMKIIIGIARGLKYLHTEIEPPFTISELNSNAVYLTEDFSPKLVDFESWKTILERSEKNSGSVSSQGAVCVLPNSLEARHLDLKGNIYAFGVLLLEITSGRPPYCKDKGYLVDWARDYLEMPEVMSYVVAPELKHFRYEDLKAICEVITLCISPDPSVRPSMRELCIMLESRIDTSINVELKASSLAWAELALSS 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01117 662 FunFam Inactive receptor-like serine/threonine-protein kinase 337 444 - -
Spst3g01117 662 Gene3D Ribonuclease Inhibitor 139 259 IPR032675 -
Spst3g01117 662 MobiDBLite consensus disorder prediction 257 275 - -
Spst3g01117 662 Gene3D Phosphorylase Kinase; domain 1 331 444 - -
Spst3g01117 662 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 25 188 - -
Spst3g01117 662 MobiDBLite consensus disorder prediction 257 283 - -
Spst3g01117 662 Gene3D Ribonuclease Inhibitor 27 138 IPR032675 -
Spst3g01117 662 Gene3D Transferase(Phosphotransferase) domain 1 445 652 - -
Spst3g01117 662 ProSiteProfiles Protein kinase domain profile. 363 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01117 662 PANTHER PROTEIN MALE DISCOVERER 2 14 660 - -
Spst3g01117 662 Pfam Protein tyrosine and serine/threonine kinase 367 633 IPR001245 GO:0004672|GO:0006468
Spst3g01117 662 SUPERFAMILY Protein kinase-like (PK-like) 342 637 IPR011009 -
Spst3g01117 662 SUPERFAMILY L domain-like 27 235 - -
Spst3g01117 662 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01117 Spst-Chr3 14545617 14549454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01117 9 637 Receptor kinase-like Gene Family AT2G01210 26.410 1.90e-55 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Spst3g01117 PK_Tyr_Ser-Thr 1.2e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01117 - - gmx:100781978 1166.76