Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01099 ATGTCTGGATGCAATAAATCACCTAAAAATGATCAACAATCAATAAAATATTGGCGGATTCAACATGGAGGAGCTTCCTTTAAGGCTGATCTTTCTTGTGTAGATTATTTGCCTACACGTTCCAACAACGAGGATAAGCAACCGTATGGAAGTTGTCAACCGAAGTCCCCTCAGATATTGAGCACAGCTCAGCTCATCTCTGCAATAGGCCAGGTATGCGATTCTGCAAGTCACTCACTTTCGGCTTTACTCCCAAAGGAAAATGTGAATCAGGATGATAAAGGATTTCCAAAAGAGAAAATTCTGGATAGCATTGGAGACAGAAAGATTGAGCTCGTATATACTTCAAATGGCACTAGATTCTATCCTCTTACTGGGGGTGCTGCAAAGATTGTGCAGGAAAAATTGGATTTCCCCAAGGTAATGCAGAAGATGTTACTATTTGAATCTCCTAATGGAAGTCAAGATTATATCCATTCTTTATTCCAGAGATTTTCACAGGCTAGTAATAAAATTACAAATAAAGATTTGAAAAAAATGGAACTTGGGAGGGAGGAAATGTCATGTAAATCAGGAAATGTATATTGGTGGGTTGGTAGGAATGCTAACATGCTAAATTGTCGAGTGAATGTTACCCAGCCTGATAACCTGGAAACTAATTCTCCAGTTGCAGGGGGTGGAATTTCCTTAGATACAAGCACTCCTGCACTGGCTAACGAGGAGAGGGATGTGTGCAGTCCTGATTCAATCACACACCAAACTCAATCATTGTCTAATGCTGCAATTCCGAACACAACAATAATTAGCCCTCTGTGTTCAGACTATTTTCTGCAAGCTGTGCCCGGTGCTAAGGAAGATGTTGGTGCTTGTCAGACCCTTTCCTCCAGTATCTGTGCAGACTATCAAATTAATTGTTTAGCTTCATGTAATAATGCTTCTGAGCAGTGCCTTCATGAGATTAATGGTAATGAATCACTGGAAGTCCAAAAATGGCGTTTCCTGGATGTAACTAATGATGAACCTAAGCTTCAGAACATTTCTGCAACCCATCCAAAGCCTTTTAATTCCCAAGCCAAGCAAGAACATGCTTTTTCTGGGGCGTTAGCTGGTGTATGTGTCAGCCTTTGTCTGCATCCTGTTGACACAATTAAGACTGTTATTCAATCATGCCGTGCTGAACACCGGTCCATTTTTTACATTGGCAAATCAATTGTTTCTGATAGAGGTTTGCTTGGACTATATCGTGGAATTACCACAAACATTGCATCTTCAGCTCCAATTTCTGCAGTCTATACTTTTTCCTATGAATCGGTTAAAGCAACTTTGCTTCCGTATCTTCCAAAGGAGTATTATGCTTTTGCCCATTGTGTAGGAGGTGGTTGTGCAAGCATTGCCACCTCTTTCATTTTTACTCCAAGTGAGCGAATAAAACAGCAGATGCAAGTTCGTTCTCATTATCGCAACTGCTGGGATGTATTGGTTGGAATTATCAGAAATGGTGGTTTTACCTCCCTATATGCAGGTTGGAGGGCTGTACTATGCCGGAATGTTCCACATTCAATTATCAAGTTTTACACATATGAAAGCTTGAAGCAAGTGATGCCATCAAGTATTCAACCCAACACGTGTCAGACTTTAGTATGTGGAGGATTAGCAGGATCTACAGCTGCTTTATTCACAACTCCTTTTGATGTGATCAAAACGAGATTACAAACACAGATTCCTGGATCTGCAAGCCAATACGATAGTGTGCTCCATGCTCTTTACAAAATCAGTAAGGGTGAAGGTTTGAAAGGCTTATACAGGGGGTTGATTCCACGGTTGATTATGTACATGACGCAAGGATCACTGTTTTTTGCTTCATATGAATTTTTCAAGAGGGCATTTTCTCTAGAAGCATCACATCCCAGAGATTCATGCATTCAGGCCAATGACGGGAATCTTACTTCTATTGGTCATGATGGCGTTCCTTGCTGTCTCACGGACCCTGATTCACCCTCCGATTCCATCCTCTTGAATAACTTGTTTTTGTCTTAA 2037 0.4084 MSGCNKSPKNDQQSIKYWRIQHGGASFKADLSCVDYLPTRSNNEDKQPYGSCQPKSPQILSTAQLISAIGQVCDSASHSLSALLPKENVNQDDKGFPKEKILDSIGDRKIELVYTSNGTRFYPLTGGAAKIVQEKLDFPKVMQKMLLFESPNGSQDYIHSLFQRFSQASNKITNKDLKKMELGREEMSCKSGNVYWWVGRNANMLNCRVNVTQPDNLETNSPVAGGGISLDTSTPALANEERDVCSPDSITHQTQSLSNAAIPNTTIISPLCSDYFLQAVPGAKEDVGACQTLSSSICADYQINCLASCNNASEQCLHEINGNESLEVQKWRFLDVTNDEPKLQNISATHPKPFNSQAKQEHAFSGALAGVCVSLCLHPVDTIKTVIQSCRAEHRSIFYIGKSIVSDRGLLGLYRGITTNIASSAPISAVYTFSYESVKATLLPYLPKEYYAFAHCVGGGCASIATSFIFTPSERIKQQMQVRSHYRNCWDVLVGIIRNGGFTSLYAGWRAVLCRNVPHSIIKFYTYESLKQVMPSSIQPNTCQTLVCGGLAGSTAALFTTPFDVIKTRLQTQIPGSASQYDSVLHALYKISKGEGLKGLYRGLIPRLIMYMTQGSLFFASYEFFKRAFSLEASHPRDSCIQANDGNLTSIGHDGVPCCLTDPDSPSDSILLNNLFLS 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01099 678 ProSiteProfiles Solute carrier (Solcar) repeat profile. 450 533 IPR018108 -
Spst3g01099 678 SUPERFAMILY Mitochondrial carrier 361 625 IPR023395 -
Spst3g01099 678 Gene3D Mitochondrial carrier domain 337 457 IPR023395 -
Spst3g01099 678 FunFam Mitochondrial substrate carrier protein-like 483 642 - -
Spst3g01099 678 Pfam Mitochondrial carrier protein 542 630 IPR018108 -
Spst3g01099 678 Pfam Mitochondrial carrier protein 361 442 IPR018108 -
Spst3g01099 678 Pfam Mitochondrial carrier protein 450 534 IPR018108 -
Spst3g01099 678 FunFam S-adenosylmethionine carrier 1, chloroplastic/mitochondrial isoform A 329 450 - -
Spst3g01099 678 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 336 635 - -
Spst3g01099 678 ProSiteProfiles Solute carrier (Solcar) repeat profile. 357 441 IPR018108 -
Spst3g01099 678 ProSiteProfiles Solute carrier (Solcar) repeat profile. 540 628 IPR018108 -
Spst3g01099 678 Gene3D Mitochondrial carrier domain 482 650 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01099 Spst-Chr3 14426062 14430242 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01099 340 629 Chloroplast and Mitochondria Gene Families AT1G07030 31.046 1.44e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01099 - - pvu:PHAVU_002G289600g 1103.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01099 3 14426062 14430242 Spst3g01099 3 14426062 14430242 ECH