Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01081 ATGGAAGGCTTCTCAATAGTCTCAAATGGGCCTTCTTTACATTCCCTTGGAGTTGAAACTGTTGGTGAATTTCCTCGAAATGTTTGTTGTATTGGAAAATACCATGTTGATAATGGTGCTTGTAAACTTACACAAAAATGCTTGTTCAATCAACTTTTCCGTCATTATCTGAAGGATAACTGTTTCAAAGGTGGTGCTCGGCCTTCGCCGGTTTTGGTCTGCGGTCAAAAGCTCGATTTGTGTAAACTTTTCTTCCTTGTGAAGGAAAGGGGTGGGTATGCCGAGGTGTCGGCTAAAGGATTGTGGGGTTCTGTGATCAAGGAATTGGGTTTTAACCTTGAAGTTTTTATACCAGTGAAATTAGTGTACGACAAGTATCTCAATGATTTTGAAAGGTGGCTCAAGAAAACTTTTGAAGAGAAGATTTTAAAAAATGGGAATCATGGATATGATTGGGGTTTGAAATGTTTGTCATTGGATATAGAGAAAGAGTTCAGAGACCTGTTATGTCCAAATCTAAAGGACAAAACTGATGATGAACTTTTCATGTCAAAATCAAATAAAAAAAAGAAAAACTCTGATTTGGTTAACGGCAAGAAAGGTAATAATCTACCGGACACCAAAGATCAAAATAATAAATCTGAGGATGTCCAACACAATGAAGGTGATAATAATGAAAAATCCTGTAATGGAATTAAGGACAATCCTGCTACCTTGGGTGCAGAAGGAGCTGACAAGGAAGATAACCCGCGCAAACGCAAACGGGATCCATTATCCGGCATGATAAACTGGATGAAGCATATTGCAAAGCATCCTCTTGGTCCTTTAACTCAACCGATACCAAAACCATCGAAGTGGAAGGAGTACAAAGGCCAGGACTTTTTTGGTCAGTTTCTGAAGGCAAGAGAGGTTCTGTCACTGAGAAAGCATGAAGAACCAAATAGTGGATCGTCTTCTTTGCAGGTATAA 969 0.3911 MEGFSIVSNGPSLHSLGVETVGEFPRNVCCIGKYHVDNGACKLTQKCLFNQLFRHYLKDNCFKGGARPSPVLVCGQKLDLCKLFFLVKERGGYAEVSAKGLWGSVIKELGFNLEVFIPVKLVYDKYLNDFERWLKKTFEEKILKNGNHGYDWGLKCLSLDIEKEFRDLLCPNLKDKTDDELFMSKSNKKKKNSDLVNGKKGNNLPDTKDQNNKSEDVQHNEGDNNEKSCNGIKDNPATLGAEGADKEDNPRKRKRDPLSGMINWMKHIAKHPLGPLTQPIPKPSKWKEYKGQDFFGQFLKAREVLSLRKHEEPNSGSSSLQV 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01081 322 SMART bright_3 44 136 IPR001606 GO:0003677
Spst3g01081 322 MobiDBLite consensus disorder prediction 184 257 - -
Spst3g01081 322 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 40 314 - -
Spst3g01081 322 ProSiteProfiles ARID domain profile. 43 135 IPR001606 GO:0003677
Spst3g01081 322 Pfam ARID/BRIGHT DNA binding domain 52 131 IPR001606 GO:0003677
Spst3g01081 322 Gene3D - 38 147 IPR036431 GO:0003677
Spst3g01081 322 SMART ARID_2 40 131 - -
Spst3g01081 322 MobiDBLite consensus disorder prediction 209 228 - -
Spst3g01081 322 SUPERFAMILY ARID-like 39 136 IPR036431 GO:0003677
Spst3g01081 322 CDD ARID 49 131 - -
Spst3g01081 322 MobiDBLite consensus disorder prediction 240 257 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Spst3g01081 ARID 5.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01081 - - gmx:100819320 479.174