Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01075 ATGGCAGGGACAACTACAACAACTTTCCTCAAACTTCAAAACCAGCCCACCAAGCCCAAACGACGCAAGTATCGGGAAACTACAATCTCCGCATCCGCTTCTCCAAACGACACCCAAACAACCCCTCAGCGCCGCACTCTGCAATCCCCTTCATGCTCACAACCCCAATCTCAACCCGAATCCGAACCCGAACCGTCTGCATTGCCTGATTCACCCTCCACCTACAGGATCCGCTTCTCCCCGGGGCGCTTCTCCCCGATAATGGACTTCACCCACTCCTCCCCCACCGCCAACGGCCACCACCTGCCCCAGGCCCAGGCCCACGAACCTTTCCCTTCCAGCCTCTCCAAGTTCAACTCCGCCCTCACCGCGGGCCTCTTGAACCCAATGTCCCCCCCGCCCGACAAGACCCGATCCAGCCCAACGCTCTTCGAAATGATGGCCAGCGAGCCCGATGTCCACCACAGGCCCACCACCCACATCCCTCCCACCACCACTGCCGCCGCCGCTGCGTCCTCACTCCACAAACCCCAAATTCTCGATCGCCACGCCCTCACGATGCAGCGGATTTCGGACCTGTTAGGGTCCCGCAGCCCCGGGAACCAGTTTAACGACGCCGTTTCCAGCGACATCAAGCTCACGCTCAGCTCCAAAGACGGAATCAGTGTCTCCATGAACGTGCATCGCCAAATCCTCGTCGCGCACAGTAGGTTCTTCTCGGTGAAACTCTCCGATCGCTGGACCAAGCAGCAGCAGCAGCAGCAGCGCTCGCCGGTTCCCTACGAAGTTGAAATCGCCGATTGCGACGATGTTGAGGTTTACATCGAGACCTTGAGGTTGATGTATTGTAAGGATCTTAGGAAGAAGCTCATGAGGGAGGATGTCTCCCGAGTTCTCGGTATCTTAAAGGTTTCAGCTGCCATTGGGTTTGATGCTGGGGTTTTGTCTTGTTTGGAGTACTTGGAAGCGGCACCGTGGGCGGAGGATGAGGAAGAGAAGGTGGCTTCGCTCCTGTCTGAGCTTCGTCTTGAAGCAGTTGGAGCTGGGGAGGTTTTGAAGAGGGTTTCAACTGATGCTGCTGCCAATGGAAATGAAGAGGGGAGTGATAATGAGGAGGTTCTGCTTAAGCTTATCCGTGTTGTTCTTGAAGGCAAGGATGAGAAGGCCAGGCGTGAGATGAAAGGGTTAGTGTCGAAGATGCTGCATGAAAATTCTTCTCAGAATGATCTTCGGAAGGAGTCGTTGTACTTAGCATGTGATGATTGCCTGCAGTTACTTCGTCACCATTTTTTGCAGGCTGCAGCTTTGGACTTGCAGGATGTGAGTCAAATTGCAAGACAAGCGGACAATTTGCATTGGATTTTGGATATTTTAGTTGACAGGCAAATTGCTGAGGATTTCCTGAAAACATGGGCATCTCAAGCCGATTTAGCTGAAGCTCATTCTAAAATTCCAGCAGTTCACAGGTTTGAGATTAGCAGAGTTACAGCAAGGTTGTTTGTTGGGATTGGGAAAGGACAATTGTTGGCTTCTAAAGACGTCAGGTGTTTGCTTCTAAAAACATGGCTGGTACCCTTTTATGATGACTTTGGTTGGATGAGAAGGGCATCCAAGGGGCTAGATAGGCACCTAATTGAGGATGGTCTTAGTAACACGATTCTTACTCTGCCACTTTCCTGGCAACAGGATATTTTGCTTGCTTGGTTTAATCGTTTCTTGAATTCTGGTGAAGATTGTCCAAATATTCAAAGAGGGTTTGAAGTTTGGTGGAGAAGGGCTTTCTGGAAGAGGAATGGAGAGCCAGAACGCACAAGACAATTACGAATTACAACTACATCAGTTGAGAACCCTTGA 1854 0.5135 MAGTTTTTFLKLQNQPTKPKRRKYRETTISASASPNDTQTTPQRRTLQSPSCSQPQSQPESEPEPSALPDSPSTYRIRFSPGRFSPIMDFTHSSPTANGHHLPQAQAHEPFPSSLSKFNSALTAGLLNPMSPPPDKTRSSPTLFEMMASEPDVHHRPTTHIPPTTTAAAAASSLHKPQILDRHALTMQRISDLLGSRSPGNQFNDAVSSDIKLTLSSKDGISVSMNVHRQILVAHSRFFSVKLSDRWTKQQQQQQRSPVPYEVEIADCDDVEVYIETLRLMYCKDLRKKLMREDVSRVLGILKVSAAIGFDAGVLSCLEYLEAAPWAEDEEEKVASLLSELRLEAVGAGEVLKRVSTDAAANGNEEGSDNEEVLLKLIRVVLEGKDEKARREMKGLVSKMLHENSSQNDLRKESLYLACDDCLQLLRHHFLQAAALDLQDVSQIARQADNLHWILDILVDRQIAEDFLKTWASQADLAEAHSKIPAVHRFEISRVTARLFVGIGKGQLLASKDVRCLLLKTWLVPFYDDFGWMRRASKGLDRHLIEDGLSNTILTLPLSWQQDILLAWFNRFLNSGEDCPNIQRGFEVWWRRAFWKRNGEPERTRQLRITTTSVENP 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01075 617 MobiDBLite consensus disorder prediction 1 101 - -
Spst3g01075 617 Gene3D Potassium Channel Kv1.1; Chain A 189 324 IPR011333 -
Spst3g01075 617 ProSiteProfiles BTB domain profile. 209 290 IPR000210 GO:0005515
Spst3g01075 617 MobiDBLite consensus disorder prediction 1 15 - -
Spst3g01075 617 MobiDBLite consensus disorder prediction 28 68 - -
Spst3g01075 617 Pfam BTB/POZ domain 203 299 IPR000210 GO:0005515
Spst3g01075 617 MobiDBLite consensus disorder prediction 87 101 - -
Spst3g01075 617 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 192 601 IPR038920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01075 Spst-Chr3 14138347 14140604 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Spst3g01075 BTB 0.00025 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01075 - - ccaj:109800730 1014.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01075 3 14138347 14140604 Spst3g01075 3 14138347 14140604 ECH
Spst3g01075 3 14138347 14140604 Spst9g01949 9 28687233 28689461 PCT