Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01071 ATGGCCACTAAAGGGTCAAGCTCTTCTGCTGCTGCTGCTTCAGCTTCAGGGGATGCAAAAATCAAAAGGGTTCTCACACATGGTGGTAAATATGCACAGTACAATGTGTATGGAAACTTGTTCGAGGTGTCTTCCAAGTATGTGCCTCCTATTCGCCCAATTGGTAGAGGTGTTAATGGCATCGTCTGTGCTGCTGTTAATTCCGAAACACACGAACAAGTTGCCATCAAGAAGATTGGTAACGCATTTGACAATATAATTGATGCTAAGAGGACATTGAGAGAAATCAAACTCCTTCGTCACATGGACCATGAAAATATCATTGCCATCAAGGATATCATACGACCCCCCAAAAGGGAGACCTTCAATGATGTGTACATCGTTTATGAGTTGATGGACACTGATCTTCATCACATAATTCATTCTGACCAACCTCTTGGTGAAGAACATTGCCAGTATTTCTTATACCAGCTGTTACGGGGACTGAAATATGTGCACTCAGCTAATGTTTTGCACCGTGACCTTAAGCCCAGTAATTTACTAATGAATTCAAACTGCGACCTTAAAATTGGAGACTTTGGGTTGGCAAGAACAACAACTGAAACGGATTTCATGACAGAGTATGTAGTCACACGATGGTACCGTGCCCCAGAATTGCTCCTTAACTGTTCGGAGTACACTTCTGCAATTGATGTTTGGTCTGTTGGGTGCATACTTGGTGAAATTATGACCAGAGAACCCTTGTTTCCTGGGAAAGACTATGTTCACCAATTAAGACTTATAACGGAGTTATTAGGTTCACCTGATGATGCAAGCCTCGAATTTCTCCGAAGTGATAATGCCAGAAGATACATTAGACAGCTTCCACAATACCGGAAGCAAAAATTCTCAGCCAGATTTCCTAACATGTTGCCTGAGGCATTGGACCTGTTAGAGAAGATGCTTATATTTGATCCAAACAAACGCATCACAGTTGATGAGGCACTATGTCACCCTTATCTCTCATCACTCCATAACATCAATGATGAGCCAGTCTGTCCCAGGCCATTCAGTTTTGATTTTGATCAGCCAACATGCACTGAAGAGCACGTGAAGGAGCTCATTTGGAGGGAATCAGTGAAGTTCAATCCAGATCCACCCTGCCAGTAA 1149 0.4273 MATKGSSSSAAAASASGDAKIKRVLTHGGKYAQYNVYGNLFEVSSKYVPPIRPIGRGVNGIVCAAVNSETHEQVAIKKIGNAFDNIIDAKRTLREIKLLRHMDHENIIAIKDIIRPPKRETFNDVYIVYELMDTDLHHIIHSDQPLGEEHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLMNSNCDLKIGDFGLARTTTETDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCILGEIMTREPLFPGKDYVHQLRLITELLGSPDDASLEFLRSDNARRYIRQLPQYRKQKFSARFPNMLPEALDLLEKMLIFDPNKRITVDEALCHPYLSSLHNINDEPVCPRPFSFDFDQPTCTEEHVKELIWRESVKFNPDPPCQ 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01071 382 Gene3D Transferase(Phosphotransferase) domain 1 132 361 - -
Spst3g01071 382 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 46 336 - -
Spst3g01071 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Spst3g01071 382 Gene3D Phosphorylase Kinase; domain 1 31 371 - -
Spst3g01071 382 ProSitePatterns Protein kinases ATP-binding region signature. 54 78 IPR017441 GO:0005524
Spst3g01071 382 ProSitePatterns MAP kinase signature. 83 186 IPR003527 GO:0004707|GO:0005524|GO:0006468
Spst3g01071 382 CDD STKc_TEY_MAPK 41 377 - -
Spst3g01071 382 SUPERFAMILY Protein kinase-like (PK-like) 51 342 IPR011009 -
Spst3g01071 382 Pfam Protein kinase domain 52 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01071 382 FunFam Mitogen-activated protein kinase 33 143 - -
Spst3g01071 382 ProSiteProfiles Protein kinase domain profile. 48 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01071 382 SMART serkin_6 48 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01071 382 FunFam Mitogen-activated protein kinase 132 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01071 Spst-Chr3 14074666 14077387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01071 8 377 MAP Kinase Gene Family AT4G01370 80.863 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Spst3g01071 Pkinase 1.4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01071 - K20600 gmx:100807109 753.821