Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01063 ATGGATGAATTTGCGTGCTTGAGGGACTGGGATTTGGAGGCTATTGTGAGGGGAAGCAGTGGTGAAGCCACCACTATGGACGATCCAAATCCTGATTTTTCTTGTTTCTTTTCTGACCAAGATGATCTGCTTGATAGCTTTCCCGAATTCTCAGAAACCACGAGGGTCCTTGACGATCTGGAAGAGCTTTACAAACCTTTCTACCCAGTTTTGCACCCTCTTTCACCTCACACCATCGTTACAACTTCCCTATCTATCCCCATAGAACCCCAACAAGTCAAAGAGCTTAGCACATCAGAAGAGAAAGTAGCTCTACAAGGTCTGAAAGTTCCCCCAACACCTAAGTGTAAAAAAAGCAAGAAGAGCCAGAACAAGAGTATGGTGAAGCAGGTGACAACAGCAGAAGGTCTTGACGATGCGTGGGCATGGCGTAAATATGGGCAGAAACCAATAAAGGGTTCTCCCTATCCACGAAGCTACTATAGATGCAGCAGTTCCAAAGGGTGTTTGGCGAGGAAACAGGTTGAAAGGAGCCACTTAGATCCTGCAGTTTTTCTGGTTACGTACACTGCTGAACACAGCCATCCCCACCCAACTCGAAGAAATTCTCTTGCTGGGACCACTCGGAAGAACAATTCCCTGATTCCCCCTCCCACCACTCGTAACCAGAAGACTACTTGTTCCTCAAGGACACCTTTGGTAATGCAATCCATTGAAGATGGACTTGTAACTAGTGTCCAACAAAGCATGGACTTGAAGAAAGAGCAAGATTTTCTTGAGTGGTTGGATGATGATAGTGCTCAATTTGGTGATGGTTGGATTCCAAGCTCAGATCTTGAGAAGTTTATTGGACTTGAGTGCCAACATTTTGCATTAGATGGAGGTTTCATGGATGCTTATGCACACTCTTGA 912 0.4539 MDEFACLRDWDLEAIVRGSSGEATTMDDPNPDFSCFFSDQDDLLDSFPEFSETTRVLDDLEELYKPFYPVLHPLSPHTIVTTSLSIPIEPQQVKELSTSEEKVALQGLKVPPTPKCKKSKKSQNKSMVKQVTTAEGLDDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERSHLDPAVFLVTYTAEHSHPHPTRRNSLAGTTRKNNSLIPPPTTRNQKTTCSSRTPLVMQSIEDGLVTSVQQSMDLKKEQDFLEWLDDDSAQFGDGWIPSSDLEKFIGLECQHFALDGGFMDAYAHS 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01063 303 FunFam WRKY transcription factor 22 120 191 - -
Spst3g01063 303 Pfam WRKY DNA -binding domain 138 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g01063 303 MobiDBLite consensus disorder prediction 194 226 - -
Spst3g01063 303 SMART WRKY_cls 137 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g01063 303 MobiDBLite consensus disorder prediction 200 226 - -
Spst3g01063 303 SUPERFAMILY WRKY DNA-binding domain 131 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst3g01063 303 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 89 230 IPR044810 GO:0003700
Spst3g01063 303 Gene3D WRKY domain 118 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst3g01063 303 ProSiteProfiles WRKY domain profile. 132 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01063 Spst-Chr3 13975566 13976852 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01063 1 248 WRKY Transcription Factor Family AT4G23550 45.038 8.62e-54 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst3g01063 WRKY 2.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01063 K13426 - gmx:102663255 477.248