Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01054 ATGGCGGAGCACCACGAGCACGAGGAGGCGAAGGGTGAATCGTTGTTGGACAAGATTTCCGCGAAGATCCACGACCACGATTCTTCGTCTTCGTCGGATTCCGACAACGAGAAAACCGGGCCCTCTGATTCCTTCAAGTCAAAGGTTTTCAGGCTTTTCGGAAGGGAAAAGCCCATTCACCATGTTCTTGGCGGTGGAAAACCGGCTGATGTTTTTCTATGGAGAAATAAGAAGATATCAGCATCGACACTCGGAGTTGCTACAGCTATATGGGTTCTGTTTGAATTGCTTGAGTACCATCTTCTCACTTTGGTTTGTCACTTCGTGATACTTGCTCTCGCGGGGTTGTTCTTGTGGTCCAATGCATCTACATTCATCAACAAGAGTCCGCCCAAGATCCCACAGGTGCACATTCCAGAGCAGCCTGTATTACAATTTGCCTCTGCTCTGAGAATTGAGATCAATCGGGCTTTTTCAGTATTAAGGGATATTGCATCTGGAAGGGATCTCAAGAAGTTCTTATCTGTTATTGCTGGACTATGGGTTTTCTCTATTCTGGGGAGTTGCGCTAACTTCTTGACGTTGTTTTACATAGCTTTTGTTTTGCTCCACACTGTGCCTGTGATATATGAGAAATATGAAGATCAAGTGGACTCTTTTGGTGAGAAGGCGATTGCCGAGATTAAGAAGCAATATGCAGTGTTTGATGCCAAGGTTTTGAGCAAGATACCCAAAGGACCTTTAAAAGATAAAAAGAAAGATTGA 765 0.4458 MAEHHEHEEAKGESLLDKISAKIHDHDSSSSSDSDNEKTGPSDSFKSKVFRLFGREKPIHHVLGGGKPADVFLWRNKKISASTLGVATAIWVLFELLEYHLLTLVCHFVILALAGLFLWSNASTFINKSPPKIPQVHIPEQPVLQFASALRIEINRAFSVLRDIASGRDLKKFLSVIAGLWVFSILGSCANFLTLFYIAFVLLHTVPVIYEKYEDQVDSFGEKAIAEIKKQYAVFDAKVLSKIPKGPLKDKKKD 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01054 254 Pfam Reticulon 69 223 IPR003388 -
Spst3g01054 254 PANTHER RETICULON 36 244 - -
Spst3g01054 254 ProSiteProfiles Reticulon domain profile. 68 254 IPR003388 -
Spst3g01054 254 MobiDBLite consensus disorder prediction 23 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01054 Spst-Chr3 13882246 13883941 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01054 - - gmx:100779587 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01054 3 13882246 13883941 Spst3g01054 3 13882246 13883941 ECH
Spst3g01054 3 13882246 13883941 Spst10g00913 10 9930321 9932529 ECH