Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01050 ATGGGTAACTGCAGCAGTAGCCACGGCGGTGCCGCCCCCTCCACAACCACACACTCCGACGACCTTCCCCGGCGCAACGGCATCACCGTCCTACCTCCGAACACGAACCCTTCACCCCAACTGCCGAAGCCCCAAACGTCTTCCTCGCTAGGCCGCGTGCTGGGCCGGCCCATGGAGGACGTGCGGTCAATTTTCATCTTCGGGCGCGAGCTGGGCCGCGGGCAGTTCGGCGTGACGTATCTGGTGACCCACAAGGTCACGAAGGAGCAGTTCGCGTGCAAGTCAATCGCGACGCGCAAGCTCGTCAACCGCGACGACATCGACGATATCCGGCGCGAGGTCCAGATCATGCACCACCTCACCGGTCATCGCAACATCGTGGAGCTCAAGGGCGCCTACGAGGACCGCCACTCCGTCAACCTCATCATGGAGCTGTGCGCCGGCGGCGAGCTATTCGACCGGATCATCACCAAAGGCCACTACTCCGAGCGCGCCGCTGCCAACTCCTGCCGCCAGATCGTCACGGTGGTGCACAACTGCCACTCCATGGGCGTGATGCACAGGGACTTGAAGCCCGAGAATTTCTTATTGCTCAGCAAGGACGATGATTCCCCTCTCAAGGCCACGGATTTTGGCCTCTCCGTCTTCTTCAAGCCAGGAGATGTGTTTAGAGACCTTGTTGGGAGTGCTTACTATGTTGCTCCTGAGGTGTTGAGAAGAAGCTATGGGCCTGAGGCTGATATTTGGAGTGCTGGGGTTATACTGTACATTCTGCTGTCTGGTGTTCCACCTTTCTGGGCAGAAAATGAACAGGGTATCTTTGATGCTATTCTTCGTGGACATATTGATTTCGCATCGGATCCTTGGCCTTCCATATCAAGTAGTGCGAAAGATTTGGTCAAGAAGATGCTACGAGCTGACCGTAAAGAACGGCTTTCAGCAGCTGAAGTACTGAATCATCCCTGGATGAGAGTGGATGGAGATGCATCTGATAAGCCTCTTGATATTGCTGTTTTATCCAGGATGAAGCAATTCCGAGCAATGAACAAGCTAAAAAAAGTCGCCCTGAAGGTTATTGCTGAAAATCTTTCTGAAGAAGAAATTATTGGCTTGAAGGAAATGTTCAAATCCATGGATACAGATAACAGTGGAACAATCACATTCGAAGAGTTGAAAGCTGGTCTCCCAAAACTGGGTAGTAAACTTTCTGAGTCGGAAGTAAGGCAATTGATGGAAGCGGCTGATGTAGACGGAAATGGAACCATTGATTACATTGAATTTATAACTGCTACTATGCACATGAATAGAATGGAAAGAGAGGATCACCTTTATAAAGCCTTTGAATATTTTGACGATGATAAGAGCGGGTACATCACAATGGAAGAGTTGGAATCTGCCCTCAAGAAGTATAATATGGGTGATGAGAAAACAATAAAGGAGATCATCGCCGAAGTTGATACAGACAATGATGGAAGAATTAACTATGATGAGTTTGTAGCCATGATGAGGAAAGGCAACCCTGACATAAGCCACGTAACCCACAGACGTCGCAAATAA 1557 0.5029 MGNCSSSHGGAAPSTTTHSDDLPRRNGITVLPPNTNPSPQLPKPQTSSSLGRVLGRPMEDVRSIFIFGRELGRGQFGVTYLVTHKVTKEQFACKSIATRKLVNRDDIDDIRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMELCAGGELFDRIITKGHYSERAAANSCRQIVTVVHNCHSMGVMHRDLKPENFLLLSKDDDSPLKATDFGLSVFFKPGDVFRDLVGSAYYVAPEVLRRSYGPEADIWSAGVILYILLSGVPPFWAENEQGIFDAILRGHIDFASDPWPSISSSAKDLVKKMLRADRKERLSAAEVLNHPWMRVDGDASDKPLDIAVLSRMKQFRAMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGLPKLGSKLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRMEREDHLYKAFEYFDDDKSGYITMEELESALKKYNMGDEKTIKEIIAEVDTDNDGRINYDEFVAMMRKGNPDISHVTHRRRK 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01050 518 Gene3D Transferase(Phosphotransferase) domain 1 151 330 - -
Spst3g01050 518 Pfam Protein kinase domain 68 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01050 518 FunFam Calcium-dependent protein kinase 1 67 150 - -
Spst3g01050 518 MobiDBLite consensus disorder prediction 1 53 - -
Spst3g01050 518 SMART serkin_6 65 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01050 518 SUPERFAMILY Protein kinase-like (PK-like) 65 324 IPR011009 -
Spst3g01050 518 ProSiteProfiles Protein kinase domain profile. 65 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g01050 518 ProSiteProfiles EF-hand calcium-binding domain profile. 402 437 IPR002048 GO:0005509
Spst3g01050 518 SMART efh_1 370 398 IPR002048 GO:0005509
Spst3g01050 518 SMART efh_1 406 434 IPR002048 GO:0005509
Spst3g01050 518 SMART efh_1 442 470 IPR002048 GO:0005509
Spst3g01050 518 SMART efh_1 477 505 IPR002048 GO:0005509
Spst3g01050 518 ProSitePatterns EF-hand calcium-binding domain. 379 391 IPR018247 -
Spst3g01050 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Spst3g01050 518 ProSiteProfiles EF-hand calcium-binding domain profile. 438 472 IPR002048 GO:0005509
Spst3g01050 518 Gene3D Phosphorylase Kinase; domain 1 67 150 - -
Spst3g01050 518 Gene3D - 331 507 - -
Spst3g01050 518 FunFam calcium-dependent protein kinase 1 151 330 - -
Spst3g01050 518 MobiDBLite consensus disorder prediction 1 34 - -
Spst3g01050 518 FunFam Calcium-dependent protein kinase 1 331 506 - -
Spst3g01050 518 ProSiteProfiles EF-hand calcium-binding domain profile. 473 508 IPR002048 GO:0005509
Spst3g01050 518 ProSitePatterns EF-hand calcium-binding domain. 486 498 IPR018247 -
Spst3g01050 518 SUPERFAMILY EF-hand 362 504 IPR011992 -
Spst3g01050 518 ProSitePatterns Protein kinases ATP-binding region signature. 71 94 IPR017441 GO:0005524
Spst3g01050 518 PANTHER SERINE/THREONINE-PROTEIN KINASE 61 498 - -
Spst3g01050 518 ProSitePatterns EF-hand calcium-binding domain. 415 427 IPR018247 -
Spst3g01050 518 ProSiteProfiles EF-hand calcium-binding domain profile. 366 401 IPR002048 GO:0005509
Spst3g01050 518 Pfam EF-hand domain pair 441 503 IPR002048 GO:0005509
Spst3g01050 518 Pfam EF-hand domain pair 371 431 IPR002048 GO:0005509
Spst3g01050 518 CDD STKc_CAMK 65 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01050 Spst-Chr3 13832725 13838951 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01050 51 517 EF-hand Containing Proteins AT4G23650 80.942 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Spst3g01050 Pkinase 2e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01050 K13412 - gmx:100777096 974.541