LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst3g01045	ATGAACGACGCAGATGTCTCTAGGCAAATCCAGCAGATGGTGCGGTTCATCCGCCAGGAAGCAGAGGAAAAAGCCAACGAGATCTCTGTCTCCGCCGAAGAGGTATCTCTTCATTTCACCGTTTTATCCTCCGCTTTCCAATCCATGCCCTCAAACCGAATCGTCTTTTTCCTTCTGCAGGAATTCAATATCGAGAAGCTGCAGTTGGTGGAAGCCGAAAAGAAGAAGATCAGGCAAGAGTACGAACGCAAAGAACGCCAAGTCGAAATTCGCAAGAAGATATCTTTATCGAACGGTTTTGAGTTGCTGAATTCCCGAATGCATGCAATTAAGGTCACTTATGATATATCCTACCGGATCCTTGTGGCCTTGTCGTACTATTCAGTAAAATCAATAATTAAGCTGTTGACATCTGTGGCAAATTACTTGAACTCAAGGATATTGTCGAATTTATGTTTTGAGGGACAATTGATTGTTTGTTGCAGTGAGTACTCGATGCAGCTGAATGCTTCTCGAATTAAAGTTCTTCAAGCTCAGGATGACGTGATCAGTTCCATGAAAGAAGCTGCTTCCAAGGAACTTTTGAGTGTGAGTCATCATCATCATTTGACTTTGTCTCATCATGACCATGTGTACAGAAACCTTCTGAAAGATCTCATTATTCAGTGTTTGCTAAGACTGAAAGAACCTTCTGTCTTACTGAGATGTCGGAAAGATGACCTTCACTTGGTAGAGCATGTGCTGGATTCTGCTGGACAGGAGTATGCTGGTAAAGCAAATGTTGAACCCCCAGAGATCATTGTTGACAACCAAGTCTATCTTCCACCTGGACCCAGTCATCACAATCCCCATGATATCTACTGTTCTGGTGGGGTGGTGCTGGCTTCTCGTGATGGAAAGATTGTGTGTGAAAATACTCTTGATGCACGACTTGATGTAGTGTTCCGTAAAAAGCTCCCTGAGATTCGAAAGCAGCTCTTTGGACAAGTTGTTGCTTGA	999	0.4344	MNDADVSRQIQQMVRFIRQEAEEKANEISVSAEEVSLHFTVLSSAFQSMPSNRIVFFLLQEFNIEKLQLVEAEKKKIRQEYERKERQVEIRKKISLSNGFELLNSRMHAIKVTYDISYRILVALSYYSVKSIIKLLTSVANYLNSRILSNLCFEGQLIVCCSEYSMQLNASRIKVLQAQDDVISSMKEAASKELLSVSHHHHLTLSHHDHVYRNLLKDLIIQCLLRLKEPSVLLRCRKDDLHLVEHVLDSAGQEYAGKANVEPPEIIVDNQVYLPPGPSHHNPHDIYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLFGQVVA	332

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst3g01045	332	Gene3D	-	1	36	-	-
	Spst3g01045	332	Gene3D	-	58	88	-	-
	Spst3g01045	332	Gene3D	-	196	330	IPR038495	-
	Spst3g01045	332	PANTHER	ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED	163	329	IPR002842	GO:0033178\|GO:0046961\|GO:1902600
	Spst3g01045	332	SUPERFAMILY	V-type ATPase subunit E-like	181	328	-	-
	Spst3g01045	332	Coils	Coil	64	87	-	-
	Spst3g01045	332	Pfam	ATP synthase (E/31 kDa) subunit	163	327	IPR002842	GO:0033178\|GO:0046961\|GO:1902600
	Spst3g01045	332	Pfam	ATP synthase (E/31 kDa) subunit	60	116	IPR002842	GO:0033178\|GO:0046961\|GO:1902600

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst3g01045	Spst-Chr3	13765084	13769533	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst3g01045	163	332	Primary Pumps ATPases(2)	AT4G11150	67.647	1.08e-80	243

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst3g01045	K02150		-	gmx:106794127	315.464

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