Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g01041 ATGTTCCTTCTTCATGAAATCGTAGCTGGTGGTATTGGGTGCAACTTCATTTCTGGAGACCTTCTTGAAGCTACAAGCATGGATGATGCAATGAGTAACCTTGTGTTATTATTGAGATGTCGGAAAGATGACCTGCACTTGGTAGAGAATGTGCTGGATTCAGCTGCACAGGAGTATGCTGATAAAGCAAATGTTGATCCCCCAGAGATCGTTGTTGTCAACCGAATCTATCTTCCACCCAGACCAAGTCATCACAATTATCATGATATCTATTGTTCTGGTGCAGTGGTGTTGGCTTCTCATGATGGAAAGATTGTGTGTGAAAATACTCTTGATCCACGACTCGATGTAGTGTTCCGAAAGGAGAGGGGATCCGAAAGCAGCTCTTTGGACAAGTTGTTGCTTGAAGATTTTGCTTGTATTGTTTCGTTGCCCCTGGAATATTTGTATTCTGAAGCAAAAACTTGCCTTTGA 474 0.4241 MFLLHEIVAGGIGCNFISGDLLEATSMDDAMSNLVLLLRCRKDDLHLVENVLDSAAQEYADKANVDPPEIVVVNRIYLPPRPSHHNYHDIYCSGAVVLASHDGKIVCENTLDPRLDVVFRKERGSESSSLDKLLLEDFACIVSLPLEYLYSEAKTCL 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g01041 157 Pfam ATP synthase (E/31 kDa) subunit 36 122 IPR002842 GO:0033178|GO:0046961|GO:1902600
Spst3g01041 157 Gene3D - 22 132 IPR038495 -
Spst3g01041 157 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 35 122 IPR002842 GO:0033178|GO:0046961|GO:1902600
Spst3g01041 157 SUPERFAMILY V-type ATPase subunit E-like 36 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g01041 Spst-Chr3 13706967 13711630 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g01041 36 120 Primary Pumps ATPases(2) AT4G11150 63.529 5.86e-33 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g01041 K02150 - gmx:100500452 156.377