Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00959 ATGGGGATTTGCTTTAGCATTGAAGACCAGAACAACTTCTCCGTCCCCGATTCCGAACCCAAGCCTAACGCCAAGTCTCCAGGTCATGAATCTGGCGCTCCAATTGCTTCTATAAACATCAAAGATCTCCGCGAAGGTGCTGGATACAGCAATGTGGACAGTTTCACGTACGAGGAACTGAGGCTAGCCACGAAGCATTTTCGTCCCGATTTCATCTTGGGAGAAGGAGGCTTCGGAGTTGTATATAAAGGCGTTATAGACCACAGTGTGAGGTCGGGTTACAAGGCTACCGAGGTCGCCATTAAGGAACTTAATCGCGAAGGATTTCAAGGAGACAGGGAATGGCTCGCGGAAGTTAACTATTTAGGTCAATTCAGTCACCCTAATCTGGTGAAGCTCATTGGATATTGCTGTGAGGATGAACATCGGTTATTGGTCTATGAATACATGGCAAGCGGGAGCTTGGAGAAACACCTATTCCGCAGAGTGGGCTCAACATTGACTTGGTCAAAAAGAATGAAGATTGCTTTACATGCTGCGAGGGGGCTTGCTTTTCTTCATGGTGCAGAAAGACCTATTATATATCGTGATTTCAAGACTTCAAATATCTTGCTAGATGCGGATTTCAATGCGAAGCTTTCAGACTTTGGCCTTGCAAAGGATGGCCCGATGGGGGACCAAACCCATGTTTCAACACGAGTAATGGGCACGTATGGATATGCTGCTCCCGAGTATGTCATGACAGGGCATTTGACAGCTCGAAGTGATGTCTATGGTTTTGGGGTGGTACTACTTGAAATGCTTATTGGTAGAAGGGCATTAGACAAGAGCAGGCCCAGCCGTGAACACAACTTGGTCGAGTGGGCCCGCCCGCTACTGAATCATAATAAGAAACTTTTAAAAATTTTGGACCCAAAACTAGAGGGACAATATTCAAGTAAAACTGCACTGAAGGTGGCCCATTTAGCATACCAATGTCTTAGCCAAAACCCGAAAGGAAGACCGCTAATGAGCCAGGTTGTTGAAATGCTCGAAAACTTTCAGTCAAAGGGGGAAAATGAGGAAGATCAAATGCTTCAAACGGGTGGCAGCAGTATAACCCTTTATGAGGTTCCCAAGGGCAGCAATGTCACTCCAACTTAA 1143 0.4611 MGICFSIEDQNNFSVPDSEPKPNAKSPGHESGAPIASINIKDLREGAGYSNVDSFTYEELRLATKHFRPDFILGEGGFGVVYKGVIDHSVRSGYKATEVAIKELNREGFQGDREWLAEVNYLGQFSHPNLVKLIGYCCEDEHRLLVYEYMASGSLEKHLFRRVGSTLTWSKRMKIALHAARGLAFLHGAERPIIYRDFKTSNILLDADFNAKLSDFGLAKDGPMGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYGFGVVLLEMLIGRRALDKSRPSREHNLVEWARPLLNHNKKLLKILDPKLEGQYSSKTALKVAHLAYQCLSQNPKGRPLMSQVVEMLENFQSKGENEEDQMLQTGGSSITLYEVPKGSNVTPT 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00959 380 FunFam Probable serine/threonine-protein kinase PBL8 150 362 - -
Spst3g00959 380 Gene3D Transferase(Phosphotransferase) domain 1 150 367 - -
Spst3g00959 380 ProSiteProfiles Protein kinase domain profile. 67 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00959 380 FunFam Serine/threonine-protein kinase BIK1 35 149 - -
Spst3g00959 380 PANTHER OS01G0588500 PROTEIN-RELATED 47 348 - -
Spst3g00959 380 SUPERFAMILY Protein kinase-like (PK-like) 50 345 IPR011009 -
Spst3g00959 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Spst3g00959 380 ProSitePatterns Protein kinases ATP-binding region signature. 73 102 IPR017441 GO:0005524
Spst3g00959 380 MobiDBLite consensus disorder prediction 11 32 - -
Spst3g00959 380 Pfam Protein tyrosine and serine/threonine kinase 73 344 IPR001245 GO:0004672|GO:0006468
Spst3g00959 380 Gene3D Phosphorylase Kinase; domain 1 42 149 - -
Spst3g00959 380 CDD STKc_IRAK 73 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00959 Spst-Chr3 12991049 13001248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00959 54 344 Glycoside Hydrolase AT3G07070 51.701 1.20e-101 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Spst3g00959 PK_Tyr_Ser-Thr 3.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00959 - - gmx:100800465 724.546