Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00947 ATGGCGGGTGAGAAGGTCGACAAGATTCGTCAAATCGTACGTCTCAAGCACCTCATGTCGCGCTGGAAGAACATCAGCCTCCGCCGCCGTTCCGATGACCCTTCCTCCACGCGCCGCCCTCCCTCCGGCTTCACCTTCGTCTACGTCGGCCCCGACCGCACGCGCTTCGCCATCCCGGCGCGTTTCCTCAACCTCCCCGTCTTCGAAGACCTTCTCAAACAAACGGAGGAACAGTTCGGACTCCGAGGTAACGGCGGTTTGGTCCTCCCTTGCCAAGTCCCCTTCTTCTCTAACGTCGTTAAGTTTCTCCACAAAGACGAACACAAGTACGGAAAACTCTCTCTGCAAGACTTCCTCAACTTGGTCTCCGACGCTGACGTGAACGATTCCTGTAAGGAAAACGTCGTCGTTTTCACCCCTCTGCTGCAGAAAGCAGAGGTTTGA 444 0.5631 MAGEKVDKIRQIVRLKHLMSRWKNISLRRRSDDPSSTRRPPSGFTFVYVGPDRTRFAIPARFLNLPVFEDLLKQTEEQFGLRGNGGLVLPCQVPFFSNVVKFLHKDEHKYGKLSLQDFLNLVSDADVNDSCKENVVVFTPLLQKAEV 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00947 147 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 30 98 IPR003676 GO:0009733
Spst3g00947 147 Pfam Auxin responsive protein 14 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00947 Spst-Chr3 12884906 12885349 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00947 5 117 Calmodulin-binding Proteins AT3G43120 28.188 1.05e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00947 K14488 - gmx:100797463 233.417