Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00938 ATGAGGTTAACGTCACCTGCGATTTTCAACCTTCTCATTCTCTGCGATCTCCTTCTTTGTCTTACCTCATTCTCTTTCTCTCTCCTCGCCGCTGACGCCGATTCAAAGCCGGAGCTTCTCCTCTCCGGAACCAACACAACCGCCGTCGTTAATGCCTCGCTTGCGAGATCTGACGATGATAGCTTGGCGAACATGATTGATCGGGCTCTCGAGAGAGAGTTCCCCGACAATGAGCAGAATGAAGGTGCCGATCCTGGTGGTTTCAACAACAGTGTTGCTGAACAGCAGCACTCTAGCGACCTAATTCAGGTGGTAGAGGTGTCTAGTTTTAAGCTAGACTTTAATCTGGCTGTTTTGGAAACTGTTGCCAGAGTTATTCCCAAGAAAAATGAAAGCAAAGAGGAGAAGTATGCGCCTCTTTCGTCATTTCAGCTCCACGATGTTTTCAACTTGGATAATGAGAATAGGGCAGATGATATGCCAACTTTAATTGACCGGAAGGACAATGTCTTTATCATATCCAATCCCAAGTCAAAGTATCCAGTTCTTCAATTAGACTTGAGATTGATATCAGATCTTGTGGTTGTCATTGTCTCTGCAACCTGTGGTGGCATTGCCTTTGCTTGTGCTGGACAACCAGTGATAACTGGATATCTGCTGGCAGGATCACTCATAGGCCCAGGAGGTTTGAGTTTTGTTAGTGAAATGGTCCAAGTTGAGACAGTTGCTCAATTTGGTGTCATCTTTTTGCTCTTCGCATTGGGCTTAGAGTTTTCAACAACGAAGCTTCGAGTTGTTCGAGCATTATGTGGTGGTAAATCATCTGAAGGAATATTTGTTGGTGCATTTCTATCCATGTCTTCAACCGCTGTGGTCTTGAAATTCTTAATGGAAAGGAATAGCGTCAATGCACTTCATGGTCAGGTTACAATTGGAACGCTGATACTGCAGGATTGTGCTGTTGGTTTGCTCTTTGCACTGCTTCCTGTTTTGGGTGGAACATCAGGTGTTCTTCAAGGAGTAGTGTCCATGACTAAGTCATTGGTGACCTTAATTGCATTTTTGGCCATTTTGACAATATTATCTCGGACATGTGTGCCGTGGTTCCTTAAGCTTATGATAAGCTTATCCTCCCAGACCAATGAGCTTTATCAATTGGCATCAGTGGCATTCTGCCTACTTGTTGCTTGGTGTAGTGATAAGCTGGGTTTAAGTCTTGAACTAGGTTCCTTTGCTGCGGGAGTGATGATATCAACAACAGATCTTGGTCAACATACACTTGAGCAAGTTGAGCCAATTCGCAACTTTTTTGCTGCTCTATTCTTGGCCAGCATTGGGATGCTTATAGATGTCCATTTCCTTTGGAATCATGTTGACATTTTAGTGGCAGCTGTTATATTGGTGATCATTATAAAAACAATTGTAGCTGCAACTGTTGTCAAGGGGTTTGGATACAACAACAAGACTTCACTTCTTGTTGGAATGTCCCTGGCACAAATTGGGGAATTTTCCTTTGTTCTTCTCAGCCGTGCATCAAATCTTCATTTAGTTGAGGGAAAGTTGTATCTATTGCTCCTTGGAACAACAGCTCTTAGTCTGCTTACACAAACAGAAATAATGCAGGTGACTACACCTTTGCTCTTCAAACTAATTCCTGCGGTTGTGCATCTTGGTGCATTGTTGCGGTGGTTCCCTCCTGATAGTTCGGCTGAGTTTGCATTTAAAGGGGACAGCTTTCGTTCGAACAGTACTAAGCGCATTACTTTGATTGTTCAAGGCTCTCATGATTCATAA 1794 0.4337 MRLTSPAIFNLLILCDLLLCLTSFSFSLLAADADSKPELLLSGTNTTAVVNASLARSDDDSLANMIDRALEREFPDNEQNEGADPGGFNNSVAEQQHSSDLIQVVEVSSFKLDFNLAVLETVARVIPKKNESKEEKYAPLSSFQLHDVFNLDNENRADDMPTLIDRKDNVFIISNPKSKYPVLQLDLRLISDLVVVIVSATCGGIAFACAGQPVITGYLLAGSLIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRALCGGKSSEGIFVGAFLSMSSTAVVLKFLMERNSVNALHGQVTIGTLILQDCAVGLLFALLPVLGGTSGVLQGVVSMTKSLVTLIAFLAILTILSRTCVPWFLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLGQHTLEQVEPIRNFFAALFLASIGMLIDVHFLWNHVDILVAAVILVIIIKTIVAATVVKGFGYNNKTSLLVGMSLAQIGEFSFVLLSRASNLHLVEGKLYLLLLGTTALSLLTQTEIMQVTTPLLFKLIPAVVHLGALLRWFPPDSSAEFAFKGDSFRSNSTKRITLIVQGSHDS 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00938 597 Pfam Sodium/hydrogen exchanger family 194 267 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Spst3g00938 597 Pfam Sodium/hydrogen exchanger family 270 537 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Spst3g00938 597 Gene3D - 187 547 IPR038770 -
Spst3g00938 597 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 268 588 IPR045158 GO:0015386|GO:0071805|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00938 Spst-Chr3 12755767 12763692 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00938 30 597 Antiporters AT2G19600 74.286 0.0 819
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00938 K26735 - gmx:100788884 886.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00938 3 12755767 12763692 Spst3g00938 3 12755767 12763692 ECH