Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00936 ATGAATAAAATGTCAGAAGAAAATGCCAATAATAAGAAATGGATGCGCTGTGGAGTCACTGTTAAGCCTGGATTTTCACTTGTGTCTGCTTTAACCGGAAGCGTTTCAGATGGCTTTTGGTGGCTGATTCTCCTTGCAAGTTCAGAATTTGAGATGAGCAGCCAAAAGGGTTCTCATGAAGAAGAGATGGGTACCTCAGAAATCACCGGTAAAGTGGTTGTGGTTGCAGTTAAAGCTTCTAGAGATATTTCAAGGACTGCTTTGGTGTGGGCTTTGACTCATGTTGTTCAACCAGGGGATTGCATTAAGTTGTTGGTGGTCATTCCGGCTCCTTCTTCAAGCAAGAGGGTATGGGGACTTTCAAGATTTACTACTGACTGTGCCTCTAGTAATTGGAGATCCAGTTTAGGCACCGCTTCAGATCAGAAAGAAGTTATTACAAATTCCTGTTCTCAATTAGTGCTTCAACTCCATGATTTTTATGATCCAGAGAAGATAAAGATCAGAGTGAAGATTCTTTCTAGTTCTTTATACGGAGCTGTGGCTGCTGAGGCCGAGAGAGTCCAGTCAAGCTGGGTTATACTGGACAAAAAGTTGAAACATGAAAAGAAATACTGCATGGAGCAGCTGCATTGCAATATTGTAATTATGAAGCGGTCTAGGCCAAAGATTCTGCGCTTGAATTTGAACAGTTCACCTAAGATGGAACTAAACATGGGTTGTCCATTGACACTTGCAAGAAACTTGAAAGACAACATTGATCATGCAGATATAATTAGAGGTCCAGCTGTTACTCCTGCTAGCAGTCCTGAACAAGGGTCACCACCACTGACTGCAACTGATATTGGAACATCATCAATATCAAGCTCAGATCCTGCTACTTCCCCATTTTTCCACTCTGACAATTATGAGAGACAAAGGAGAGGTTTTACCTTTGTTCATGAGGGACTGACCAACCTAGAGGATATTGAGTCTGACTCCGAGAGTGAAAAGTTAAGTATGTCATCCAAGAGTTCATATTTTCAGCCATGGATTTCAAATGTGATTTGCATGGATGGTGATTTCTCAAAGCACGAAGACAACATGCAAAGATCCAGTGACAAGAATTTGGCCACTGCCTATGAAGCTTTGCTTCAGAAATTCTCAAAGTTGGATGAAGATCCTATACTAGGAATGCTTAATTGTAAAATTGATGTGAACTTGAGCAAAAGTGTTAGAGAAGCAATTTCACTAGCTAAAAGTTTACCTCCTGGTCCTCCTCCGTTGTGCTCTATTTGTCAGCACAAGGCACCTGTGTTTGGAAATCCACCAAGGTGGTTTACATTTGCTGAATTGCAACTTGCCACGGGTGGTTTTTCACAAGCAAATTTCTTAGCGGAAGGTGGTTTCGGGTCTGTACACCGTGGAGTTCTACCTGATGGACAAGTCATTGCTGTGAAACAGTATAAATTAGCCAGCACTCAAGGAGATAAAGAGTTTTGCTCAGAAGTAGAGGTCTTAAGCTGTGCACAGCATCGCAATGTTGTGATGCTAATTGGGTTCTGTGTGGAGGATGGAAGAAGATTGCTTGTTTATGAATACATCTGCAATGGCTCTCTTGATTCTCACCTCTACAGACGAAAGCAGAATGTACTGGAATGGTCCGCAAGGCAAAAAATTGCAGTTGGAGCAGCTCGTGGTTTGAGATACCTTCATGAAGAATGTAGAGTGGGTTGTATTGTGCACCGTGACATGCGGCCTAACAATATCCTCCTCACTCATGATTTTGAAGCTTTAGTAGGAGATTTTGGACTTGCTAGGTGGCAACCAGATGGAGACATGGGTGTGGAAACCAGAGTGATAGGAACATTTGGGTATTTGGCCCCAGAATACGCTCAGAGTGGTCAAATTACTGAAAAAGCTGATGTGTACTCGTTTGGGATAGTATTGCTGGAGCTTGTCACAGGACGAAAAGCAGTGGACATAAACCGCCCCAAAGGCCAACAATGTCTAAGTGAATGGGCACGACCATTGCTTGAAAAACAAGCTATTTATAAACTTGTAGATCCGAGCTTAAGAAACTGCTATGTTGATCAAGAGGTGTATCGCATGCTGCAATGTTCCTCTCTGTGCATTGGACGAGATCCTCATTTAAGGCCTCGAATGTCTCAGGTGCTGAGGATGCTGGAAGGTGACATTCTAATGTGA 2187 0.4266 MNKMSEENANNKKWMRCGVTVKPGFSLVSALTGSVSDGFWWLILLASSEFEMSSQKGSHEEEMGTSEITGKVVVVAVKASRDISRTALVWALTHVVQPGDCIKLLVVIPAPSSSKRVWGLSRFTTDCASSNWRSSLGTASDQKEVITNSCSQLVLQLHDFYDPEKIKIRVKILSSSLYGAVAAEAERVQSSWVILDKKLKHEKKYCMEQLHCNIVIMKRSRPKILRLNLNSSPKMELNMGCPLTLARNLKDNIDHADIIRGPAVTPASSPEQGSPPLTATDIGTSSISSSDPATSPFFHSDNYERQRRGFTFVHEGLTNLEDIESDSESEKLSMSSKSSYFQPWISNVICMDGDFSKHEDNMQRSSDKNLATAYEALLQKFSKLDEDPILGMLNCKIDVNLSKSVREAISLAKSLPPGPPPLCSICQHKAPVFGNPPRWFTFAELQLATGGFSQANFLAEGGFGSVHRGVLPDGQVIAVKQYKLASTQGDKEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYRRKQNVLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILLTHDFEALVGDFGLARWQPDGDMGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGIVLLELVTGRKAVDINRPKGQQCLSEWARPLLEKQAIYKLVDPSLRNCYVDQEVYRMLQCSSLCIGRDPHLRPRMSQVLRMLEGDILM 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00936 728 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 528 728 - -
Spst3g00936 728 MobiDBLite consensus disorder prediction 261 300 - -
Spst3g00936 728 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 424 527 - -
Spst3g00936 728 Gene3D Phosphorylase Kinase; domain 1 424 527 - -
Spst3g00936 728 ProSiteProfiles Protein kinase domain profile. 452 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00936 728 Pfam Protein tyrosine and serine/threonine kinase 456 722 IPR001245 GO:0004672|GO:0006468
Spst3g00936 728 ProSitePatterns Tyrosine protein kinases specific active-site signature. 573 585 IPR008266 GO:0004672|GO:0006468
Spst3g00936 728 SUPERFAMILY Protein kinase-like (PK-like) 432 723 IPR011009 -
Spst3g00936 728 MobiDBLite consensus disorder prediction 267 300 - -
Spst3g00936 728 CDD STKc_IRAK 458 724 - -
Spst3g00936 728 Gene3D Transferase(Phosphotransferase) domain 1 528 726 - -
Spst3g00936 728 PANTHER OS01G0750732 PROTEIN 346 726 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00936 Spst-Chr3 12686198 12690151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00936 411 718 Trihelix Transcription Factor Family AT1G68690 50.321 4.28e-99 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Spst3g00936 PK_Tyr_Ser-Thr 9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00936 - - gmx:100305413 1275.38