Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00928 ATGGAGAATATATCAAAGTCAACAGTGTTCCCCAATACAGTTATATTGCAGAGTGAGGGATTGCTAAAGTATATATTGGAGACTGGCGTTTATCCACGAGAAGCAGAGACCCTCAAAGAGCTAAGAAATGCAACTGCAAAGCACCCTCTGGGCTTCATGGGAGCTGCACCTGATGCGGGTCAGCTAATGGCCTTGCTCTTGAAGTTGTTGAATGCTAAAAAGACAATCGAAGTGGGAGTTTTTACTGGATACTCTCTTCTCCTCACAGCACTCACCATTCCAGATGATGGAAAGATAGTAGCCATGGATCCAGACAGAAAAGCTTATGAGATAGGACTACCATTCATTAAAAAGGCTGGTGTTGAACACAAGATTGACTTCATAGAGTCTCCAGCTTTACCAGTTCTTGATAAACTCTTAGAAGATGCTGCAAATGAGGGGAGTTTTGACTTTGCATTCATTGATGCTGACAAAAACAATTACTGGAATTACCACGAGAGGCTTATGAGATTGGTGAAGATTGGTGGGATAGTTGCTTATGATAACACACTGTGGGGAGGAACTGTTGCCTTGCCTGAAAAGGCAGTTTCGGAAGCCAAACGAGAGTGGAGATTATTATCACTTGCTTTCAACGAAGCAATTTCAAACGATTGTCGTGTTGAAATTGCTTTTGTTTCAATTGGTGATGGAGTCATTATCTGCAGGCGTCTTAGCTGA 717 0.4226 MENISKSTVFPNTVILQSEGLLKYILETGVYPREAETLKELRNATAKHPLGFMGAAPDAGQLMALLLKLLNAKKTIEVGVFTGYSLLLTALTIPDDGKIVAMDPDRKAYEIGLPFIKKAGVEHKIDFIESPALPVLDKLLEDAANEGSFDFAFIDADKNNYWNYHERLMRLVKIGGIVAYDNTLWGGTVALPEKAVSEAKREWRLLSLAFNEAISNDCRVEIAFVSIGDGVIICRRLS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00928 238 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 14 237 IPR002935 GO:0008171
Spst3g00928 238 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 18 236 IPR029063 -
Spst3g00928 238 Pfam O-methyltransferase 30 237 IPR002935 GO:0008171
Spst3g00928 238 PANTHER O-METHYLTRANSFERASE-RELATED 11 237 - -
Spst3g00928 238 Gene3D Vaccinia Virus protein VP39 5 238 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00928 Spst-Chr3 12613602 12614885 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00928 15 237 Monolignol Biosynthesis Gene Families AT4G26220 65.471 3.90e-109 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00928 K00588 - gmx:100795229 404.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00928 3 12613602 12614885 Spst3g00928 3 12613602 12614885 ECH