Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00927 ATGTCCTCTAATCCAGTAATACTGCAGGGTGAGAAGTTGACCAAGTATATACTGGAGACCAGCGTTTATCCACGAGAAGCAGAGATTCTCAAAGAGCTAAGGAATGTCACTGATACTCACCCTTGGGGCTTTATGGGCGCTGCTCCCGATGCGGGTCAGCTAATGGCCTTGCTCTTGAAGGTGTTGAATGCTAAAAAGACAATTGAAGTGGGAGTTTTTACAGGATACTCTCTTCTCCTAACTGCACTCACCATTCCAGATGATGGAAAGATAATAGCCCTGGATCCAGATAGAGAAGCTTATGAGATAGGACTACCATTCATTAAGAAGGCTGGTGTAGAGTACAAGATCGACTTCATACAGTCTCAAGCTTTACCTGTTCTTGATAAACTCTTGGAAGACGATTCAAATAAGGGAAGTTTTGACTTTGCCTTCGTTGATGCTGATAAAGATAACTATTGGAATTACCACGAGCGGCTTCTTAAACTGGTGAAGATTGGTGGGTTAATAATCTATGATAACACTCTCTGGGGTGGAACTGTTGCCTGGCCTGAAGAGGATGTTCCACTACCCAAAAGAAAATACAGGCAGGCTGCTCTAGCTTTCAACAAAGCAATTGCAGATGATTCTCGTGTTCAAATTTCGGCTGTTTCAATTGGTGATGGTTTCACTATCTGTCGGCGTATTAATTGA 693 0.4286 MSSNPVILQGEKLTKYILETSVYPREAEILKELRNVTDTHPWGFMGAAPDAGQLMALLLKVLNAKKTIEVGVFTGYSLLLTALTIPDDGKIIALDPDREAYEIGLPFIKKAGVEYKIDFIQSQALPVLDKLLEDDSNKGSFDFAFVDADKDNYWNYHERLLKLVKIGGLIIYDNTLWGGTVAWPEEDVPLPKRKYRQAALAFNKAIADDSRVQISAVSIGDGFTICRRIN 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00927 230 CDD AdoMet_MTases 68 172 - -
Spst3g00927 230 Pfam O-methyltransferase 19 229 IPR002935 GO:0008171
Spst3g00927 230 PANTHER O-METHYLTRANSFERASE-RELATED 3 229 - -
Spst3g00927 230 Gene3D Vaccinia Virus protein VP39 2 230 IPR029063 -
Spst3g00927 230 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 6 229 IPR002935 GO:0008171
Spst3g00927 230 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 10 228 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00927 Spst-Chr3 12611379 12612911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00927 7 229 Monolignol Biosynthesis Gene Families AT4G26220 65.022 4.04e-111 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00927 K00588 - gmx:100780516 417.542