Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00888 ATGGAGGAGGATGACCTACTCGAACGATTCGACTCCGAGTTCACGTCCACCAGCTCCGGCTCCGTCATTTCTTCCACACTCAGCACCGACGATTTCCGGAACCTCACGAGCTCCGGCGACATTTCCTCCATCAGCAGCGGCTCTGGCGAGATTCCTCCTGTCGCGGTCACCGAGGTGGTACTTGCGCCACCGCTGCTCCACCGCGCGGGGCTCAATGACTGCGAGACGCCCACGGCCAGGGAGAAGTGCGTCGGGAGGAGTAACAAGGGAGTGAGTTGGGGACATACTTCGGTGATCGGGAGGAGGAAAGAGATGGAGGACGCCGTAGCCGTTATTCCGGGATTCATGTCTCGCACGTGCGATCACGTCGGCGGTTGTACGGCTCCCGGCTCCAGATCCTCCGGCGAGATCGCTCCCGTTCATTTCTTCGGCGTTTACGACGGCCACGGTGGCTCACAGGTGGCTAAGTTCTGTGCTAAGCGGATGCACGATGTTATAGCAGAGGAGTGGGACCGAGAAATGGCAGGTGGAGCTGAATGGCAGAGAAGATGGGAAGCCGTATTTGCTAACAGTTTTGAGAGGACTGACAATGAAATCCTGTCAGACGCAGTTGCACCTGAAATGGTAGGATCTACTGCCTCTGTGGTTGTTCTATCTGGTTGCCAAATTATTGCATCCAACTGCGGCGACTCAAGGGTAGTTCTTTGCCGCAGGACACAAACTATCCCCTTGACAGTGGATCAAAAGCCGGATAGACAAGATGAACTCTTGAGAATTGAAGGAGAAGGAGGAAAAGTCATAAACTGGAATGGAGCTAGGGTGTTTGGTGTTCTTGCCATGTCCAGGGCCATAGGTGATCGGTACTTGAGACCATGGATTATTCCGGTGCCTGAGATAACTTTCACAGAAAGAACAGACGAGGATGAGTGCTTAGTTTTGGCAAGTGACGGACTCTGGGATGTACTGAGCAATGAAGAAGTTGGAGAAGTGGCACGCCACATTCTTAGAAGACGCCGCAGATCTATGTCAGTGGAGGAAACATCTCCTGCACAAGTTGTTGCCGACAGCCTGACTGAAATTGCATACGGTAGAAATAGTAAAGATAACATTTCGATCATAGTTGTTGATCTGAAATCAAAGAGAAAACGTCAGCAAAGGCCTCCTTTAATATCCTAA 1176 0.5196 MEEDDLLERFDSEFTSTSSGSVISSTLSTDDFRNLTSSGDISSISSGSGEIPPVAVTEVVLAPPLLHRAGLNDCETPTAREKCVGRSNKGVSWGHTSVIGRRKEMEDAVAVIPGFMSRTCDHVGGCTAPGSRSSGEIAPVHFFGVYDGHGGSQVAKFCAKRMHDVIAEEWDREMAGGAEWQRRWEAVFANSFERTDNEILSDAVAPEMVGSTASVVVLSGCQIIASNCGDSRVVLCRRTQTIPLTVDQKPDRQDELLRIEGEGGKVINWNGARVFGVLAMSRAIGDRYLRPWIIPVPEITFTERTDEDECLVLASDGLWDVLSNEEVGEVARHILRRRRRSMSVEETSPAQVVADSLTEIAYGRNSKDNISIIVVDLKSKRKRQQRPPLIS 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00888 391 Gene3D - 82 387 IPR036457 -
Spst3g00888 391 FunFam Protein phosphatase 2C 51 85 385 - -
Spst3g00888 391 SMART PP2C_4 82 375 IPR001932 -
Spst3g00888 391 CDD PP2Cc 94 377 IPR001932 -
Spst3g00888 391 ProSiteProfiles PPM-type phosphatase domain profile. 92 377 IPR001932 -
Spst3g00888 391 PANTHER PROTEIN PHOSPHATASE 79 377 IPR015655 GO:0004722|GO:0006470
Spst3g00888 391 Pfam Protein phosphatase 2C 100 370 IPR001932 -
Spst3g00888 391 ProSitePatterns PPM-type phosphatase domain signature. 142 150 IPR000222 GO:0043169
Spst3g00888 391 SUPERFAMILY PP2C-like 79 378 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00888 Spst-Chr3 12290975 12298063 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00888 93 387 PP2C-type Phosphatase Gene Family AT4G26080 50.159 2.50e-99 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00888 K14497 - gmx:100793293 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00888 3 12290975 12298063 Spst3g00888 3 12290975 12298063 ECH