Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00869 ATGGTGAGAGTGGTTCCCATGGGTTCTTCGATTCGACCCGCTCTCTCCTCCCTTACCTTTTCATCACCTTCCTCTCTTTCTCTCTTCAACCCTTCTCCCCGTCTCTCTTTCTCTGTGTCTCAGTCCCATAGTTTTGGCTTAAAAGCTTCCAGGGTGTTGAGACACGATGGTAACTCCGTGAGAGTCTCGGCGTCAGGGGATGTGTCTCAATCTGTCGCAGCTGCTTCACAAGAAAATGTGCTTGAGTGGGTCAAGCAGGACAAGCGAAGAATGCTTCACGTTGTGTATCGCGTTGGAGACTTGGACAGGACCATAAAGTTTTATACAGAGTGCTTAGGAATGAAGCTCCTCAGAAAGAGGGACATACCGGAGGAGAAATATACTAATGCCTTTCTTGGATATGGGCCTGAAGACTCACACTTTGTTATTGAACTGACATACAATTATGGAGTTGACAAGTATGACATTGGAACTGGATTTGGCCATTTTGGTATTGCCGTTGATGATGTTGCAAAAGCAGTGGAGTTAATAAGAGCTAAGGGTGGTAAAATAACTAGAGAGCCTGGTCCTGTCAAGGGAGGGCGCTCAGTAATTGCATTTATTGAAGATCCCGATGGTTACAAATTTGAACTTATAGAAAGAGGTCCCACTCCTGAACCCTTATGCCAAGTAATGCTTCGAGTGGGTGATCTTAATCGTTCCATAGAATTTTATGAGAAGGCATTTGGTATGGAGCTGCTTCGTACTCGAGATAATCCGGAATACAAGTATACCATAGCAATGCTGGGTTATGGTCCAGAAGATAAAAGCACTGTTCTGGAGTTGACTTACAATTATGGAGTCACTGAATACGACAAAGGAAATGCTTATGCTCAGATTGCAATTGGCACAGATGATGTGTACAAAACTGCAGAAGCGATTAAACTATCTGGAGGAAAGATTACTCGGGAACCTGGACCATTACCTGGTATCAACACCAAAATTACTGCATGCTTGGATCCTGACGGTTGGAAGTCGGTTTTTGTAGATAATGTTGATTTTCTAAAGGAGTTGGAATAG 1059 0.4372 MVRVVPMGSSIRPALSSLTFSSPSSLSLFNPSPRLSFSVSQSHSFGLKASRVLRHDGNSVRVSASGDVSQSVAAASQENVLEWVKQDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKAVELIRAKGGKITREPGPVKGGRSVIAFIEDPDGYKFELIERGPTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRTRDNPEYKYTIAMLGYGPEDKSTVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNVDFLKELE 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00869 352 Gene3D - 217 352 IPR029068 -
Spst3g00869 352 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 220 344 IPR037523 -
Spst3g00869 352 FunFam Lactoylglutathione lyase 217 352 - -
Spst3g00869 352 CDD GlxI_Ni 91 212 - -
Spst3g00869 352 PANTHER LACTOYLGLUTATHIONE LYASE 70 352 - -
Spst3g00869 352 FunFam Lactoylglutathione lyase 87 216 - -
Spst3g00869 352 ProSitePatterns Glyoxalase I signature 1. 223 244 IPR018146 GO:0004462|GO:0046872
Spst3g00869 352 NCBIfam lactoylglutathione lyase 90 215 IPR004361 GO:0004462|GO:0046872
Spst3g00869 352 CDD GlxI_Ni 221 342 - -
Spst3g00869 352 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 91 211 IPR004360 -
Spst3g00869 352 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 223 338 IPR004360 -
Spst3g00869 352 ProSitePatterns Glyoxalase I signature 2. 157 169 IPR018146 GO:0004462|GO:0046872
Spst3g00869 352 Gene3D - 64 215 IPR029068 -
Spst3g00869 352 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 89 219 IPR029068 -
Spst3g00869 352 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 221 342 IPR029068 -
Spst3g00869 352 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 90 214 IPR037523 -
Spst3g00869 352 ProSitePatterns Glyoxalase I signature 1. 93 114 IPR018146 GO:0004462|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00869 Spst-Chr3 12155814 12160875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00869 223 341 Calmodulin-binding Proteins AT1G08110 28.276 1.69e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00869 K01759 - gmx:100775714 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00869 3 12155814 12160875 Spst3g00869 3 12155814 12160875 ECH
Spst3g00869 3 12155814 12160875 Spst4g02641 4 66351444 66354869 PCT