Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00866 ATGGGTTTCGAAAATGATCCGTACCGCGATGAGGACGGGGAGCCCTTGATGGATTACGACGACGTTCAATCCGATCGCGAGCCCTCTCCGGAGCCGCGCCACCAACTCGATGATTACGAGGACGTCGACGAGTGGCGCGGCCGCGAGACGCCGGTGCACGACAACGATGTGGCGCGCTCGAAGCCGCGGAAGAGGCTCATCAAAAAGGGTGACGCTGGGAAGCAGTCGGTGGCGCCGGAGCTCGAGGATGAGGAGGAGGGGTATGTTCCCGAGGCGAGGTTTGAGGAGGGGGATGGAAGGAAAAGGAAGAAGGGGAAGGAGATTGAGAATGGGAAGAAGGAGAAGAGGCTGAAGGGGGAGAAGAGGTTTGGTAGTGATGGTGGGAAAGGTAGCTCCAAATTTGGGGGTTCCAAGAAAGGGTTTGGTGGGAAGGCTGGAAAGGATCATGATGGTGAAGTTAAGGAGATGTGGGATACAATTGCTGGGGGAGATTCTGAGGATGATCACGAAGGTGTCAGGAATATGGATGATGACAACTTTATAGATGACACTGGAGTGGAACCTGCTTATTACGGTAGTGATGAACCACGTTCTCCTGGTGATGCTCCTCAGGCAGAGGAAGGTGAAGAGGATGAAGAGATCAAGGATCTTTTCAAGATAGGGAAAAAAAGGAAGAAGAACGAGAGAAGTCCTGCTGAAATAGCTTTATTAGTTGAGAATGTCATGGCTGAGCTTGAGGTTACAGCTGAGGAGGATGCGGATCTTAATAGGCAGGGGAAGCCTGCCATTAATAAACTCAAGAAGTTGACCCTTCTTACAGAAGTCCTCTCAAAGAAGCAGCTTCAATTAGAGTTTTTAGATCATGGAGTGCTAACTTTATTGAAGAACTGGCTTGAGCCACTTCCTGATGGAAGTTTGCCAAATATAAATATTCGCACGGAAATTTTGAAGATTTTGAATGATTTTCCTATAGACCTAGGGCAGTATGATAGAAGAGAACAACTGAAGAAGAGTGGCCTTGGAAAGGTAATTATGTTTTTATCAAAATCCGATGAAGAAATTAACGTAAACAGGAAACTAGCCAAGGAACTGGTGGACAAGTGGAGCCGACCCATATTTAATAAGAGTACCCGGTTCGAAGACATGAGAAATATGGAGGAAGATAGGGTTCCTTTTAGGAGACCGTCGGTTAAAAAGCCTGCAAATAAAGCTGCAGGAATATCAAGAGATAGTGATCTTGATTTAGAAATTTCACAGCCTAGGGCTGGGCAGTCCTCGTCTAGGCAGCTCACTTCGAGGCCAGAAGCAACACCTTTGGATTTTGTGATACGTCCCCAATCTAAAATTGATCCAGAAGAAATTAGAGCCCGGGCAAAGCAAGCTGCCCAAGATCAGCAGCGTACGAAGAATTTGTTTAAAGGTGAATAA 1428 0.4727 MGFENDPYRDEDGEPLMDYDDVQSDREPSPEPRHQLDDYEDVDEWRGRETPVHDNDVARSKPRKRLIKKGDAGKQSVAPELEDEEEGYVPEARFEEGDGRKRKKGKEIENGKKEKRLKGEKRFGSDGGKGSSKFGGSKKGFGGKAGKDHDGEVKEMWDTIAGGDSEDDHEGVRNMDDDNFIDDTGVEPAYYGSDEPRSPGDAPQAEEGEEDEEIKDLFKIGKKRKKNERSPAEIALLVENVMAELEVTAEEDADLNRQGKPAINKLKKLTLLTEVLSKKQLQLEFLDHGVLTLLKNWLEPLPDGSLPNINIRTEILKILNDFPIDLGQYDRREQLKKSGLGKVIMFLSKSDEEINVNRKLAKELVDKWSRPIFNKSTRFEDMRNMEEDRVPFRRPSVKKPANKAAGISRDSDLDLEISQPRAGQSSSRQLTSRPEATPLDFVIRPQSKIDPEEIRARAKQAAQDQQRTKNLFKGE 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00866 475 MobiDBLite consensus disorder prediction 388 475 - -
Spst3g00866 475 MobiDBLite consensus disorder prediction 1 213 - -
Spst3g00866 475 Pfam TFIIS helical bundle-like domain 317 372 IPR017923 -
Spst3g00866 475 ProSiteProfiles TFIIS N-terminal domain profile. 292 375 IPR017923 -
Spst3g00866 475 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 287 375 IPR035441 -
Spst3g00866 475 MobiDBLite consensus disorder prediction 19 61 - -
Spst3g00866 475 MobiDBLite consensus disorder prediction 142 180 - -
Spst3g00866 475 MobiDBLite consensus disorder prediction 446 462 - -
Spst3g00866 475 MobiDBLite consensus disorder prediction 418 434 - -
Spst3g00866 475 PANTHER PROTEIN IWS1 HOMOLOG 1 1 469 IPR044204 GO:0009742|GO:0032784
Spst3g00866 475 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 231 378 IPR035441 -
Spst3g00866 475 MobiDBLite consensus disorder prediction 92 127 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Spst3g00866 Med26 2.3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00866 K17498 - gmx:100801805 754.977