Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00840 ATGGAAAACCAGAACCGTCTCAAACTCCGAATCTCTCGCATGTTCCGATCCTCCTTCGGTTCCTGTCGAACCCGTCACATTACCGATGTAATGGAAAAAGCAGTTTTTGCACCACCCAACCCCATTGAACCACCCTCCCCCAAAGCCACACCCTTTCCTCCCATTTGCAGACCCAAAACAATCAGCGACACTTGCATACTGTCCTTTAACGATTCTCATTCTCTCTCCAGACGCAAAATCTCACACTGTTCATCACCTTTTCTCTGGGCCAACAACAACACCACCAACAACAACCTCAACCTTAGCCTCGGTGTCATGTCCTGTCCCCCCAGCTCCCCAAACCTTTCCCTCAACACAATCCACGAACACGATTTCATTTTCCACAACAAAACAAAGGCTTCAGCTTCGACAAAAAACGTCAGGGCCAAGAAGAAAAAGAAGAAGAGACGTGCCCAGAAGAAAAGGGACTTTTTCCCCTTTAATTCATGCGCCAAAGACACCAACTTTGGTGGCTACTGGTGGTACAGCAGTGACGAAGACGACGAAACCGACACCCTTTTTTCCTCCAAGAGCCTCTCCTCCGATTCCTCCCGATCCCGGCGCTGGCGCCGAAAAACCGACCGGAGCTCCGACATGGGTGTTCTGCCGCTGCACGGAAAGGTGAAGGACACGTTCGCGGTGGTGAAGCGCTCTAGCGACCCTTACAGTGATTTCAGGACTTCGATGCTGGAGATGATAGTGGAGAAGCAGATATTCTCGCCGGCGGATTTAGAGAATCTCTTGCAGTGTTTTCTGTCTCTGAATTCGTATCATCATCATAAGATCATTGTCCAAGTCTTCACGGAGATTTGGGAAGCTCTGTTCTCTGACTGGTTTTGA 879 0.496 MENQNRLKLRISRMFRSSFGSCRTRHITDVMEKAVFAPPNPIEPPSPKATPFPPICRPKTISDTCILSFNDSHSLSRRKISHCSSPFLWANNNTTNNNLNLSLGVMSCPPSSPNLSLNTIHEHDFIFHNKTKASASTKNVRAKKKKKKRRAQKKRDFFPFNSCAKDTNFGGYWWYSSDEDDETDTLFSSKSLSSDSSRSRRWRRKTDRSSDMGVLPLHGKVKDTFAVVKRSSDPYSDFRTSMLEMIVEKQIFSPADLENLLQCFLSLNSYHHHKIIVQVFTEIWEALFSDWF 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00840 292 Pfam Transcriptional repressor, ovate 231 288 IPR006458 -
Spst3g00840 292 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 122 289 IPR038933 GO:0045892
Spst3g00840 292 NCBIfam uncharacterized plant-specific domain TIGR01568 225 288 IPR006458 -
Spst3g00840 292 ProSiteProfiles OVATE domain profile. 227 286 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00840 Spst-Chr3 11920527 11921405 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Spst3g00840 Ovate 3.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00840 - - gmx:100776613 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00840 3 11920527 11921405 Spst3g00840 3 11920527 11921405 ECH