Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00831 ATGACAGGTCTTAGCAATGGCGCCTCCGCATTGAACAAGGTGAAGTTCACAAAGCTTTTCATCAACGGAGAGTTTGTTGACTCTGTCTCAGGAAAGACATTTGAGACAATAGATCCAAGAACAGGAGATGTTATTGCAAGAATCAGCGAAGGAGATAAAGAAGACATAGACATTGCTGTTAAAGCAGCACGTCACGCGTTTGACTTTGGTCCTTGGCCTCGCATGTCGGGCGCTGCTAGAGGTAAAATTTTGTTGAAATGGGTGGAGCTAATCGAAGAACATGCAGAAGAACTTGCAACACTAGATGCCATTGATGCGGGGAAGTTGTATCATATGTGTAAGAATGTGGAAGTTCCATCAGCGGCAAACACTCTCCGTTACTATGCTGGTGCTGCCGACAAAATTCATGGAGAGGTCTTGAAAATGTCTCGAGAGTTTCATGCGTATACACTACTGGAACCAGTTGGTGTTGTGGGACACATAACTCCTTGGAATTTTCCCAATACCATGTTTTATATTAAGGTTGCTCCTTCTTTAGCTGCTGGTTGCACCATGGTCATCAAGCCTGCTGAACAAACACCCCTCTCTGCTTTGTACAATGCTCATCTTGCTAAACTGGCTGGAATTCCAGATGGAGTGCTCAATGTAGTGACCGGATTTGGCCCAACTGCTGGTGCTGCATTAAGCTCACACATGGATGTTGATAAGGTAAGCTTTACTGGTTCAACCCAAACGGGTCGGGAGATAATGCAGGCTGCAGCTAAGAGTAACTTGAAACAAGTTTCACTTGAATTAGGAGGGAAGTCACCTCTCATAATTTTTGATGATGCTGATGTTGACAAAGCTGCTGAGCTTGCTTTAATTGGCATCCTATATAACAAGGGAGAAGTTTGTGTAGCAAGTTCTCGTGTGTTTGTTCAGGAAGGGATCTATGATGAATTTGAGAAAAAGTTGGTGGAGAAGGCAAAAGCTTGGGTCGTTGGGGATCCTTTTGATCCCAAAGTCCAACAAGGACCACAGGTTGACAAGGAACAATTTGAGAAGGTTCTTTCATATATTGAGCATGGAAAGAGAGAGGGAGCTACCCTTTTGACTGGTGGTAAAACAGTGGGAAACAAGGGCTACTTCATTGAGCCAACAATTTTCTCTGATATAAAGGACGAGATGATAATAGCACAAGATGAAATATTTGGCCCTGTGATGGCGTTGAAGAAGTTTAAGACCATCGAAGAAGCAATTAAAAGTGCTAATAACACAAAGTATGGCCTAGCAGCAGGCATAGTGACAAAGAATTTGGATACAGCAAACACTGTGTCAAGGTCCATTCGAGCAGGAACCATTTGGATCAATTGCTACTTTGCATTTGGTGATGATGTTCCTTTTGGAGGATATAAGATGAGTGGATTTGGAAAAGACCATGGATTGGAAGCACTTCACAAGTACTTACAAGTTAAATCGGTTGTAACCCCTCTTTACAATTCTCCTTGGCTTTGA 1494 0.429 MTGLSNGASALNKVKFTKLFINGEFVDSVSGKTFETIDPRTGDVIARISEGDKEDIDIAVKAARHAFDFGPWPRMSGAARGKILLKWVELIEEHAEELATLDAIDAGKLYHMCKNVEVPSAANTLRYYAGAADKIHGEVLKMSREFHAYTLLEPVGVVGHITPWNFPNTMFYIKVAPSLAAGCTMVIKPAEQTPLSALYNAHLAKLAGIPDGVLNVVTGFGPTAGAALSSHMDVDKVSFTGSTQTGREIMQAAAKSNLKQVSLELGGKSPLIIFDDADVDKAAELALIGILYNKGEVCVASSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQVDKEQFEKVLSYIEHGKREGATLLTGGKTVGNKGYFIEPTIFSDIKDEMIIAQDEIFGPVMALKKFKTIEEAIKSANNTKYGLAAGIVTKNLDTANTVSRSIRAGTIWINCYFAFGDDVPFGGYKMSGFGKDHGLEALHKYLQVKSVVTPLYNSPWL 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00831 497 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 21 485 IPR016162 GO:0016491
Spst3g00831 497 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 21 284 - -
Spst3g00831 497 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 263 270 IPR029510 GO:0016491
Spst3g00831 497 FunFam Aldehyde dehydrogenase3 267 456 - -
Spst3g00831 497 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 11 487 - -
Spst3g00831 497 FunFam Aldehyde dehydrogenase, putative 459 485 - -
Spst3g00831 497 SUPERFAMILY ALDH-like 14 493 IPR016161 GO:0016491
Spst3g00831 497 Pfam Aldehyde dehydrogenase family 25 487 IPR015590 GO:0016491
Spst3g00831 497 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 291 302 IPR016160 GO:0016491
Spst3g00831 497 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 456 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00831 Spst-Chr3 11803745 11807503 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00831 2 497 Aldehyde Dehydrogenase Gene Family AT3G24503 70.140 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00831 K12355 - gmx:100811540 929.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00831 3 11803745 11807503 Spst4g02696 4 66856902 66861842 PCT