Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00821 ATGACTCCATACGAGCTTCCTGATGGCCAGATTATTGAAGTTGGATCAGACAGATTCAAAATTCCTGATATTCTTTTTAATCCATCTCTAGTTCAGACAATCCCTGGCATGGAGAGTTTTGCAGAAATTGCTCCTTCAATACGAAATCTTCCCAAAATGATCATAGAGAGCATTAATAAGTGTGATGTGGACATTCGTAGAGAACTATTTAGTACCATACTGCTTACTGGTGGTACAGCTTCTATGCACCAACTAAAGGAACGGATTGAGAAAGACTTGCTGGAGGAGTCCCCTCAAGCTGCTAGAGTAAAAGTATTTGCCAGTGGAAATGCTACTGAAAGAAGGTTCAGTGTTTGGATCGGGGGGAGTATATTGGCTTCTCTTGGCTCCTTCCAGCAGATGTGGTTTTCCAAATCTGAGTATGAAGAGCAAGGTGCTTCTTATATCCAAAGAAAGTGCCCTTGA 465 0.4172 MTPYELPDGQIIEVGSDRFKIPDILFNPSLVQTIPGMESFAEIAPSIRNLPKMIIESINKCDVDIRRELFSTILLTGGTASMHQLKERIEKDLLEESPQAARVKVFASGNATERRFSVWIGGSILASLGSFQQMWFSKSEYEEQGASYIQRKCP 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00821 154 Pfam Actin 2 153 IPR004000 -
Spst3g00821 154 Gene3D Actin; Chain A, domain 4 3 47 - -
Spst3g00821 154 SUPERFAMILY Actin-like ATPase domain 3 153 IPR043129 -
Spst3g00821 154 Gene3D - 118 147 - -
Spst3g00821 154 FunFam actin-related protein 4 96 154 - -
Spst3g00821 154 Gene3D - 48 117 - -
Spst3g00821 154 PANTHER ACTIN 3 147 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00821 Spst-Chr3 11685030 11686953 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00821 4 153 Cytoskeleton Gene Families AT5G09810 48.667 2.61e-44 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00821 K11340 - gmx:100819549 301.212