Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00817 ATGTCTACTTCTCTTCTCATCCTTTCCACCTTCGTAATAACATTCATTATCTCCTTCATCTTCCTGCGTCGAAACCACACCAAAGATGACCGGAGACACCCCCCAGGCCCACCGCCCTTCCCGGTCATCGGTAACCTCCACATGCTGGGGAAGCTCCCGCACCGCACGCTCCGGGCCCTGGCCCAACAATACGGGCCCATCATGTCCCTGCGCCTGGGTCAGGTCCCAATCGTCGTGGTCTCCTCCTCCGAGGCCGCAGAACACTTCCTGAAAGCACACGACGCCGTTTTCGCGAGCCGTCCAATACTGGAAGCGTCCAAGTACTTCGGCTACGGCTCGAAGGGGCTGGTGTTCTCAGAGTACGGCCCGTACTGGCGGCACATGAGGAAAGTGTGCACTCTCCAACTTCTGAGCGCATCGAAGGTGGAGTCCTTTGCGCCGCTGAGGGAGCGGGAGCTGAAGCTGGCGGTGAAGTCGGTGGAGGAACGCGCCGCGAGAGGGGAGGTGCTGGACCTTAGCGCGGTGGTACAGGACCTTGTAGAAAATATCGTGTACAAGATGGTGCTGGGGTGTAGCAAGCATGACGAGTTCGATTTGAAGGGGTTGATTCAAAACGGCATGAACATCACTGGTGCGTTTAATGTGACAGATTACTTGCCTTGGCTTGGTCCTTTGGATCTTCAGGGATTAAATCGAAGTTACAAGAAAATAAGTACAGCACTTGACCAATTGTTGGAAAAGATAATAAAGGAGCATGAACACCGTTCTTCAGATGTACAAAATGAACAGCATCATAAGGACTTCATAGACATATTACTCTCACAGATGAACCAGCCAATCGATCCTTATGATGAAGGAAACCATGTCATTGATCAAACTAACATCAAGGCTATACTCTTAGATATGATTTCTGCGGCATTTGAAACTTCTGCAACTGTGGTGGAGTGGACATTATCCGAGCTCCTAAGGCATCCAAGAGTGATGAAAAACGTTCAAGATGAGCTAGATAACGTGGTTGGGAGGAACAGATTGGTGGAGGAAAATGATTTGGCGAAGTTAAGTTACTTGGATATTGTGATCAAGGAGACCTTGAGATTATATCCTCCTGGACCATTAGTCCCCCGGGAGTCGACAGAGGATGCTATAGTTCAGGGTTATTTCTTAAAGAAAAAATCAAGAATCATAATAAACTTATGGGCAATGGGAAGAGATTCTAAGATATGGTCTGAAAATGCTGAAATATTTTATCCAGAGAGATTCATCAACAACATTAATTTAGACTTCCGAGGATATGACCTCCAATATATACCATTTGGGTTTGGTCGAAGGGGATGCCCTGGAGTAAACCTAGGCTTAGCAACAGTTAAACTTGTTGTGGCTCAATTAGTACATTGTTTTAGTTGGGAACTTCCAGGAGGTATGACCCCAGTTGAGTTGGACATGAGTGAGAAATTTGGCCTCACAATACCAAGAGTCAAACACTTGCTTGCTGTGCCCAGGAATCGTCTTCGGAGGGAATCTTTTTATTGA 1530 0.4745 MSTSLLILSTFVITFIISFIFLRRNHTKDDRRHPPGPPPFPVIGNLHMLGKLPHRTLRALAQQYGPIMSLRLGQVPIVVVSSSEAAEHFLKAHDAVFASRPILEASKYFGYGSKGLVFSEYGPYWRHMRKVCTLQLLSASKVESFAPLRERELKLAVKSVEERAARGEVLDLSAVVQDLVENIVYKMVLGCSKHDEFDLKGLIQNGMNITGAFNVTDYLPWLGPLDLQGLNRSYKKISTALDQLLEKIIKEHEHRSSDVQNEQHHKDFIDILLSQMNQPIDPYDEGNHVIDQTNIKAILLDMISAAFETSATVVEWTLSELLRHPRVMKNVQDELDNVVGRNRLVEENDLAKLSYLDIVIKETLRLYPPGPLVPRESTEDAIVQGYFLKKKSRIIINLWAMGRDSKIWSENAEIFYPERFINNINLDFRGYDLQYIPFGFGRRGCPGVNLGLATVKLVVAQLVHCFSWELPGGMTPVELDMSEKFGLTIPRVKHLLAVPRNRLRRESFY 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00817 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Spst3g00817 509 Pfam Cytochrome P450 34 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g00817 509 Gene3D Cytochrome P450 19 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g00817 509 SUPERFAMILY Cytochrome P450 34 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g00817 509 FunFam Cytochrome P450 83B1 20 498 - -
Spst3g00817 509 Coils Coil 227 247 - -
Spst3g00817 509 Coils Coil 328 348 - -
Spst3g00817 509 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g00817 509 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g00817 509 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g00817 509 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g00817 509 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g00817 509 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g00817 509 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g00817 509 PANTHER CYTOCHROME P450 93A3-LIKE 10 503 - -
Spst3g00817 509 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g00817 509 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g00817 509 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g00817 509 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g00817 509 CDD CYP71-like 63 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00817 Spst-Chr3 11611808 11614292 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00817 1 503 Cytochrome P450 AT5G07990 40.467 7.84e-128 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00817 - - gmx:100814172 778.474