Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00791 ATGACATGCAAGAAGAGGTGGAGAAGGGCTTTGAATGCCATCTCTTTCGTCAAGGCTCTTCTCCACGTCTCCAACAAAGCTCTCAACATTGAAACCCCAAGGCTCTTGCGCTCATTCTCTTATCTGGCCATTGATGTTGAACAAGATCACGTGCATTCTCCACGTGTTAAAACCTTCAACTTTGATTCCAAACTCCTGGGTGACATGGTGAGGGACAAGACGCTCGAGTCTCTCACCCAATTTGGAGGCGTCAAAGAACTCGCTGCAATTCTTGAAACCGATCTCAAGCGTGGCATTGGCGACAACAAGGATGATATTGATCACCGAAAACGTGTCTTCGGTGTTAACATGTTCACCAAACCTCCATCCAAAGGTTTTCTTTCGTTTGTTCTTGAATCTTTTAAGGACACCACTATTATCATCCTTTTGGTTTGTGCTGTGCTTTCTCTTGGCTTTGGTATCAAGCAGCATGGATGGAAGGAGGGATGGTACGATGGAGGAAGCATCATATTGGCGGTTATTCTCGTCATTCTTGTCTCTTCCGTGAGCAACTTCAACCAATCTAGACAGTTCCAGAAGCTTTCTGCGAAGAGTGGGAACATAGGAGTCGAAGTAGTACGAGGTGGTCGACGCCAAAGCGTGTCAATCTTTGAGGTGGTGGTTGGTGACATTGTGTGCTTGAAGATCGGTGATCAGGTTCCAGCTGATGGAGTGTTTTTGGAGGGGCATTCGTTGAAGGTGGACGAATCTAGCATGACGGGAGAGAGTGAACACGTGCACGTGAACGGTGACACAAACCCTTTCTTGTTATCTGGCACAAAGATCAGTGATGGTTTTGCACACATGGTCGTCACTTCTGTGGGTATGAACACTGCATGGGGTGAAATGATGGGTTCGATAGCGAGAGAGGTTAATGAGGAGACACCTTTGCAAGTGCGTCTCAATAAATTGACTTCTGCTATTGGCAAGGTTGGGTTGCTGGTGGCTGCACTTGTTTTGGCGGTGTCTATGATACGTTACTTCACGGGAAGTACAAGAGATGATTTTGGAAACCGCGAATTCGTTGGGAGGAAGACAAACTTTGATGATGTTATGAATGCGGTTGTGGGAATTATTGCTGCGGCTGTGACAATTGTGGTGGTGGCCATTCCAGAAGGGTTGCCATTGGCTGTTACTTTGACTTTGGCTTATTCCATGAAGAAAATGATCAGGGATAATGCTATGGTTAGGAGAATCTCTGCTTGTGAGACAATGGGGTCGGCAACAATAATCTGTACGGATAAAACAGGTACTCTTACAATGAATGAGATGCAGGTGACTGAGGTTTGGGTGGGGAAAAGGGAAATAGAAGAAGGTGTGTATTTGGCGCCGGGTTTAGTACAATTATTGAAGGAAGGAATTGGGTTGAACACCACTGGAAGCGTTTACCAGCCCCTACAAACCTCTTTGGCAGAAATTTCAGGTAGTCCAACTGAGAAAGCGTTGCTTTCTTGGGCTGTAGTGGATTTGGGGATGGACATTGATGAAGTGAAGCAGCATTGTGAAATCATTCATGTGGAGACGTTTAACTCGGAGAAAAAGAGAAGTGGGATTTTGATGAGGGAGAAGAGAGGGAGCAACAGGATCGATACACATTGGAAGGGTGCTGCTGAGATGATATTGTCTATGTGTTCAAATTATTATGACCATACAGGGAAAATCATGATCTTGGATGATGAAGAGAGGGTTCAGATCGAGAACATTGTGACGGGCATGGCTACCAAAAGTTTACGATGCATTGCCTTTGCCCAAAAGCGCTCCAACGGCCAGGTCTGCGGAAAACTTGAAGAGACAGAACTAACATTGTTGGGGATACTTGGGTTGAAAGATCCTTGTAGGCCAGAAGTTGAAGCAGCAGTTGAATCATGCAGGAATGCTGGAGTGAAGATCAAGATGATCACAGGAGATAATGTGCACACAGCGAAGGCCATAGCCGCTGAGTGCGGGATTCTTGATCCTAGTGAAGGATTGGATGAAGAAGCTGTGGTTGAAGGGTTTCAATTCAGAAATTACTCACATGAGGAAAGAATGGATAAGATTGACAGAATCAGAGTCATGGCCAGATCATCTCCATTTGACAAGCTTCTGATGGTTCAATGTTTAAAGCAGAAGGGTCATGTTGTGGCAGTCACAGGTGATGGCACAAATGATGCACCTGCTCTAAAAGAAGCAGACATTGGACTTTCCATGGGAATAGAAGGCACTGAAGTGGCAAAGGAGAGCTCAGATATTGTTATCCTTGATGACAACTTCTCTTCTGTGGTTACAGTAATAAGGTGGGGAAGATGTGTGTATACAAACATTCAGAAGTTCATTCAGTTTCAGCTAACAGTTAATGTTGCTGCGCTGGTCATCAACTTTGTAGCTGCAGTTTCTTCTGGTAAAGTGCCTCTTACAGCTGTCCAGCTTTTGTGGGTAAACCTGATAATGGATACTCTTGGAGCTTTGGCCTTAGCCACTGAGGAACCGACTAATGATCTCATGAAGATGCCACCTGTAGGTAGAGTTAAGCCACTTATAACTAGAGTTATGTGGAGGAACCTCATTTCACAAGCATTGTACCAAGTTCTTGTATTGCTGGTTTTACAGTTCAAGGGAAGATCAATATTTGATGTCAGTGAGAAGGTGAAGAACACCCTTATTTTCAATGCTTTTGTTCTCTGCCAAGTCTTCAATGAGTTCAACGCGAGGAAGCTGGAGAAGAAGAATATATTTGAGGGACTTGGTAAGAATTGGTTGTTCATTGTAATTGTGGGCCTAACTATTGCTCTTCAGTTAGTGATGGTTGAGTTTCTGAAGGAGTTTGCCAATACTGAGAGATTGACTTGGGAGCAATGGGGTGTTTGTGTTGGCATTGGAGCTTTGTCTTGGCCAATTGGTCTGCTGGTGAAGTATATCCCAGTTGTTCGTAACGAGTAG 2958 0.4462 MTCKKRWRRALNAISFVKALLHVSNKALNIETPRLLRSFSYLAIDVEQDHVHSPRVKTFNFDSKLLGDMVRDKTLESLTQFGGVKELAAILETDLKRGIGDNKDDIDHRKRVFGVNMFTKPPSKGFLSFVLESFKDTTIIILLVCAVLSLGFGIKQHGWKEGWYDGGSIILAVILVILVSSVSNFNQSRQFQKLSAKSGNIGVEVVRGGRRQSVSIFEVVVGDIVCLKIGDQVPADGVFLEGHSLKVDESSMTGESEHVHVNGDTNPFLLSGTKISDGFAHMVVTSVGMNTAWGEMMGSIAREVNEETPLQVRLNKLTSAIGKVGLLVAALVLAVSMIRYFTGSTRDDFGNREFVGRKTNFDDVMNAVVGIIAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMIRDNAMVRRISACETMGSATIICTDKTGTLTMNEMQVTEVWVGKREIEEGVYLAPGLVQLLKEGIGLNTTGSVYQPLQTSLAEISGSPTEKALLSWAVVDLGMDIDEVKQHCEIIHVETFNSEKKRSGILMREKRGSNRIDTHWKGAAEMILSMCSNYYDHTGKIMILDDEERVQIENIVTGMATKSLRCIAFAQKRSNGQVCGKLEETELTLLGILGLKDPCRPEVEAAVESCRNAGVKIKMITGDNVHTAKAIAAECGILDPSEGLDEEAVVEGFQFRNYSHEERMDKIDRIRVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIEGTEVAKESSDIVILDDNFSSVVTVIRWGRCVYTNIQKFIQFQLTVNVAALVINFVAAVSSGKVPLTAVQLLWVNLIMDTLGALALATEEPTNDLMKMPPVGRVKPLITRVMWRNLISQALYQVLVLLVLQFKGRSIFDVSEKVKNTLIFNAFVLCQVFNEFNARKLEKKNIFEGLGKNWLFIVIVGLTIALQLVMVEFLKEFANTERLTWEQWGVCVGIGALSWPIGLLVKYIPVVRNE 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00791 985 SMART Cation_ATPase_N_a_2 74 154 IPR004014 -
Spst3g00791 985 Gene3D - 422 769 IPR023214 -
Spst3g00791 985 ProSitePatterns E1-E2 ATPases phosphorylation site. 427 433 IPR018303 -
Spst3g00791 985 CDD P-type_ATPase_Ca_PMCA-like 106 857 - -
Spst3g00791 985 FunFam Calcium-transporting ATPase 618 769 - -
Spst3g00791 985 SFLD Haloacid Dehalogenase 407 777 - -
Spst3g00791 985 Gene3D - 102 301 - -
Spst3g00791 985 FunFam Calcium-transporting ATPase 741 983 - -
Spst3g00791 985 Pfam haloacid dehalogenase-like hydrolase 423 738 - -
Spst3g00791 985 NCBIfam calcium-translocating P-type ATPase, PMCA-type 73 981 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Spst3g00791 985 PRINTS P-type cation-transporting ATPase superfamily signature 248 262 - -
Spst3g00791 985 PRINTS P-type cation-transporting ATPase superfamily signature 425 439 - -
Spst3g00791 985 PRINTS P-type cation-transporting ATPase superfamily signature 724 743 - -
Spst3g00791 985 PRINTS P-type cation-transporting ATPase superfamily signature 617 628 - -
Spst3g00791 985 PRINTS P-type cation-transporting ATPase superfamily signature 639 649 - -
Spst3g00791 985 PRINTS P-type cation-transporting ATPase superfamily signature 748 760 - -
Spst3g00791 985 Gene3D - 132 977 - -
Spst3g00791 985 Pfam Cation transporter/ATPase, N-terminus 82 149 IPR004014 -
Spst3g00791 985 SUPERFAMILY Calcium ATPase, transmembrane domain M 82 982 IPR023298 -
Spst3g00791 985 Pfam Cation transporting ATPase, C-terminus 809 979 IPR006068 -
Spst3g00791 985 SUPERFAMILY Calcium ATPase, transduction domain A 203 299 IPR008250 -
Spst3g00791 985 Pfam E1-E2 ATPase 203 404 - -
Spst3g00791 985 FunFam Calcium-transporting ATPase 435 624 - -
Spst3g00791 985 FunFam Calcium-transporting ATPase 179 301 - -
Spst3g00791 985 PRINTS H+-transporting ATPase (proton pump) signature 724 740 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst3g00791 985 PRINTS H+-transporting ATPase (proton pump) signature 756 781 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst3g00791 985 PRINTS H+-transporting ATPase (proton pump) signature 578 596 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst3g00791 985 PANTHER CATION TRANSPORTING ATPASE 55 981 - -
Spst3g00791 985 NCBIfam HAD-IC family P-type ATPase 695 806 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst3g00791 985 NCBIfam HAD-IC family P-type ATPase 368 449 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst3g00791 985 SFLD p-type atpase 407 777 IPR044492 -
Spst3g00791 985 Gene3D - 435 624 IPR023299 GO:0000166
Spst3g00791 985 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 431 629 IPR023299 GO:0000166
Spst3g00791 985 SUPERFAMILY HAD-like 423 829 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00791 Spst-Chr3 11450636 11453593 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00791 5 981 Primary Pumps ATPases AT3G22910 64.796 0.0 1219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00791 K01537 - gmx:100784119 1586.24