Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00784 ATGGCGGCGAAACGGTTTTTGGATGATTCTGATCAAGATACCAATAAGCCTGGTGATAAACGGATGAGGCCTACCAGACCTTCTTTTGCTTCGGTAATAGGAGAAGTTGTCATGGTGAAAAACTTGCAGAATCTTTTCTCAGGCTTGGAACCCTTGCTTAGAAGAGTGGTGAACGAAGAGGTGGAGCGAGTGATGAGGCATTGCGTTCCGCGTTCGATAACCAGGTCCCCTTCGTTGAGGATCCAAGCATTGGAGCAACCAACAAGCTATGAACTCATGTTCAACAAGAAGCTATTGGTCCCTATCTTCACAGGAAGCAGAATAGTAGACATAGATGGGAACCCCATCCATGTTGTTCTTTGTGACAAAAGCGGTGGTCAAATGGTTCCCACGAGTCTCCCCCACCCCATCAAGCTAGAAATCGTGGTGCTTGATGGAGATTTTCCTCCCAATAGTGATAACAGTGAGTCATGGACGAGTGAGGAATTCAACAGACACATAGTGAAGGAGAGAACAGGAAAGAGGCCGTTGCTCACAGGAGAATTGAATCTGACCATGAGGGATGGGATTGCACCAATTGAAGAAATTGAATTCACTGATAACTCCAGTTGGATTAGAAGCAGGAAGTTCAGAGTTGCTGTTAGAGTTGCTCCTGGGAGTAATCAAACTATTAGAATTCGTGAAGGCATGACCGAATCATTTATTGTTAAGGATCACCGTGGTGAATTGTACAAGAAACATCACCCACCTATGCTCCACGACGAAGTGTGGCGCCTAGAGAAGATAGGGAAAGACGGAGCTTTCCACAAAAAGTTGTCCAGAGAGGGAATAAAGAGTGTGCAAGACTTTCTTAAGTTATCTGTTGTTGATACTCAGAAGCTCAGAAAGATTCTGGGAGTTGGGATGTCGGAGAGAATGTGGGATGCGACAATCAAGCATGCAAAGACTTGTGAGAAGGGCAACAAGTACTATGTCTACCGTGGGCTTAATTTTACCATCTTTCTGAATTCCATATGTCAGTTGGTTAGAGCTGATATCAATGGCCAAAGTTTTCCGGGCAGAGAGCTAAGCAACATGACAAGGAGCTATGTGGAAAAATTGGTGAGAGAAGCATATGCTAGATGGAATGAATTGGAGGAAATTGATGGGGCTTTGTTAACCCAAGGTGAAACCATGGAACAATTTCCAAACAATCATCAAGCATCAGATATAGCATATGATCAGCAAGACTACTTTGATGATAAATCTACAGAAGGTGGCAACTATGTGCCAACTCATAATGCACAAATTGGTTGCAGCGAGTGGGGAGTGAATACAACATTTGTGAATGGCATGCTTTACAGCTTCTCAGATTCACAATCTGACAGTGACATATCGCCCTCAGTTGATGGTGCCACAAGGTGGAACTAG 1410 0.4411 MAAKRFLDDSDQDTNKPGDKRMRPTRPSFASVIGEVVMVKNLQNLFSGLEPLLRRVVNEEVERVMRHCVPRSITRSPSLRIQALEQPTSYELMFNKKLLVPIFTGSRIVDIDGNPIHVVLCDKSGGQMVPTSLPHPIKLEIVVLDGDFPPNSDNSESWTSEEFNRHIVKERTGKRPLLTGELNLTMRDGIAPIEEIEFTDNSSWIRSRKFRVAVRVAPGSNQTIRIREGMTESFIVKDHRGELYKKHHPPMLHDEVWRLEKIGKDGAFHKKLSREGIKSVQDFLKLSVVDTQKLRKILGVGMSERMWDATIKHAKTCEKGNKYYVYRGLNFTIFLNSICQLVRADINGQSFPGRELSNMTRSYVEKLVREAYARWNELEEIDGALLTQGETMEQFPNNHQASDIAYDQQDYFDDKSTEGGNYVPTHNAQIGCSEWGVNTTFVNGMLYSFSDSQSDSDISPSVDGATRWN 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00784 469 MobiDBLite consensus disorder prediction 1 26 - -
Spst3g00784 469 Pfam Calmodulin binding protein central domain 251 317 IPR046830 -
Spst3g00784 469 PANTHER OS02G0177800 PROTEIN 1 423 IPR012416 GO:0005516
Spst3g00784 469 MobiDBLite consensus disorder prediction 1 23 - -
Spst3g00784 469 Pfam Calmodulin binding protein-like N-terminal domain 90 239 IPR046831 -
Spst3g00784 469 Pfam Calmodulin binding protein C-terminal domain 322 381 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00784 Spst-Chr3 11384447 11387904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00784 3 386 Calmodulin-binding Proteins AT5G57580 49.871 3.03e-122 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00784 - - gmx:100802257 775.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00784 3 11384447 11387904 Spst4g02760 4 67413693 67418117 PCT