Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00783 ATGTTCATCAAAATTGCATTTGTTTGCTTTGTTTCTGCCTTGTTTCTCTTCTTCATCAACACCTCTGCCACCCACAACACATCATCCTTACCAACTTGTCCTACTCAACACTGCACACATGGAGCTAACATCAGCTACCCTTTTTGGCTTTCCCCAGGTTCCCCTCCAGACCAACTTTGCGGTTACCACGATCTTGGCCTTGTTTGTGATCACGGTTACGCCACTTTTTCTCTACCCACAGGATTATACTATTTCGTAAAAGATATAGACTATGAGAACCATAGGCTTCAGCTGGTGGATTTTGACACTTTAAACAAAACTTGTCCAAGGGCACTTCACAGTGTTCCCTTGGGCAACCTACCACTTACTCACTCTCCCTTCAACTTAAACCTTAGCTTTTACTACAACTGCACTAACTACCCTTCTGGTGTTCCTTCTATCGAGTGTCTCAGTTCTGGGACAAACGAGTCTTTCGTGTTTGTGACGGGGAACGAGACCAAAGGTTTTGACTGGTCCAGGAACTGTCAGGTGCAGGTTGTGGTGACAGTGATGAAGGATCAGATTGCAACTGATGGTGACTTGATCAGCCAGTTTGCTGGTGCCATGAACGAAGGGTTCGTGCTTGAATGGCAAACTGCTTCGGAATGCGTCCAGTGTGAGGCTAGTGATGGAATCTGTGGCTACAGTAACACTGGGAAGGAGGTGCTCTGCTTTTGCAAGGATGGAAGTACAAAAAGCAGTACATGTGATGCAGGGGGAAGCAGTACCGGTTTGTCAAGATTAATTATAGGTTTAATTATAGCTGGAGGAATCGGTGCACTACTGACATGCATCGTACCTTACATTTTTAGACGAAAATTTTCACCAATTTTGTCAGAAATTCGGCAGGCCAAGAAGATTGACCGAGACATAGAGGCCTTCATCGGAAATAATGGACCTCTTCCCATAAAAAGATACTCATACTCAGATTTAAAGAAAATGACCAATTCTTTTGAATCCAAACTAGGACAAGGTGGTTATGGTCAAGTATATAAAGGAAATCTATGCAGCAACTCTCCCGTGGCGGTGAAGCTACTGAATGCTTCCAATGGAAACGGGGAAGAATTTGTCAACGAGGTTATAAGCATCAGTAGAACATCTCATGTAAATATTGTTAATCTCCTTGGTTTCTGTCTTGAAGGCAAGAAGAAAGCTCTTATTTACGATTTTATGCCTAATGGATCACTTGAAAAGTATATTCACAAGAAGAATTTGGAAACTGATCCACCCTTGAGTTGGGAAAGACTGCACCACATTGCTGAAGGAATAGCAAAAGGATTGGAGTACTTGCATAGAGGGTGCAACACTCGGATATTACATTTTGACATAAAACCAAGCAACATTCTTTTGGACAAAAATTTCTGTCCTAAAATCTCTGATTTTGGGATGGCCAAGCTCTGCTCAAACACACAAAGTATCATATCTATGTATGGTGCTAGAGGGACAGTTGGGTACATAGCTCCAGAAGTGTGGAACAGAAACTTCGGAGGGGTGTCATACAAGTCTGATGTTTATAGTTATGGAATGATGATTTTGGAAATGGTTGGAGGAAGGCAAAATATGAGCATTGAAGCAAGTCGTTCAAGTGAGATATATTTTCCCCATTGGATATACAAGCATGTGAAGGTGGGAAGAAATTTAACATGGCATGAAGGTATGACCACAAAGGAAAATGAAATTTGTAAGAAAATGATTATTGTGGGATTGTGGTGCATACAGACAATCCCTTCTGACAGGCCCGCTATGAGTAGGGTGGTTGAAATGTTAGAAGGAAGCATGGATCAGTTGCAAATTCCGCCAGAGCCATTCATATTTACTCCTATGAAAACTGAAGTGGATATTTGCACCACTAGTTGCAGCGATTGA 1905 0.4205 MFIKIAFVCFVSALFLFFINTSATHNTSSLPTCPTQHCTHGANISYPFWLSPGSPPDQLCGYHDLGLVCDHGYATFSLPTGLYYFVKDIDYENHRLQLVDFDTLNKTCPRALHSVPLGNLPLTHSPFNLNLSFYYNCTNYPSGVPSIECLSSGTNESFVFVTGNETKGFDWSRNCQVQVVVTVMKDQIATDGDLISQFAGAMNEGFVLEWQTASECVQCEASDGICGYSNTGKEVLCFCKDGSTKSSTCDAGGSSTGLSRLIIGLIIAGGIGALLTCIVPYIFRRKFSPILSEIRQAKKIDRDIEAFIGNNGPLPIKRYSYSDLKKMTNSFESKLGQGGYGQVYKGNLCSNSPVAVKLLNASNGNGEEFVNEVISISRTSHVNIVNLLGFCLEGKKKALIYDFMPNGSLEKYIHKKNLETDPPLSWERLHHIAEGIAKGLEYLHRGCNTRILHFDIKPSNILLDKNFCPKISDFGMAKLCSNTQSIISMYGARGTVGYIAPEVWNRNFGGVSYKSDVYSYGMMILEMVGGRQNMSIEASRSSEIYFPHWIYKHVKVGRNLTWHEGMTTKENEICKKMIIVGLWCIQTIPSDRPAMSRVVEMLEGSMDQLQIPPEPFIFTPMKTEVDICTTSCSD 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00783 634 PANTHER RUST RESISTANCE KINASE LR10-RELATED 301 619 IPR045874 GO:0004672
Spst3g00783 634 SMART serkin_6 329 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00783 634 FunFam serine/threonine-protein kinase PBS1-like 303 403 - -
Spst3g00783 634 Gene3D Phosphorylase Kinase; domain 1 310 403 - -
Spst3g00783 634 ProSitePatterns Protein kinases ATP-binding region signature. 335 357 IPR017441 GO:0005524
Spst3g00783 634 FunFam PR5-like receptor kinase 404 614 - -
Spst3g00783 634 Pfam Wall-associated receptor kinase C-terminal 149 242 IPR032872 -
Spst3g00783 634 Gene3D Transferase(Phosphotransferase) domain 1 404 615 - -
Spst3g00783 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Spst3g00783 634 ProSiteProfiles Protein kinase domain profile. 329 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00783 634 Pfam Wall-associated receptor kinase galacturonan-binding 33 100 IPR025287 GO:0030247
Spst3g00783 634 Pfam Protein tyrosine and serine/threonine kinase 331 602 IPR001245 GO:0004672|GO:0006468
Spst3g00783 634 SUPERFAMILY Protein kinase-like (PK-like) 312 603 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00783 Spst-Chr3 11380226 11383010 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00783 34 617 Receptor kinase-like Gene Family AT5G38260 40.033 1.55e-139 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst3g00783 PK_Tyr_Ser-Thr 7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00783 - - gmx:100781977 984.941