Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00737 ATGTCTTCCGATGAGAGTAAGGTTTCTGCAGCGAGGGCTTTTACCCTTGGAGCTTGTGATTATTGGGTTAAGCCTTTGAATGAGCTAATGTTCCAGACTGTGTGGACACATGTTTATAGGAAGAACTTCAATGAAAAGATGAAGCAAAAAGATGTTGCCAGCTTGAAAGATGATAATGAGAAAAGAGGGATGAATGATGATACTGAAGTTGCTTCGTCTTCTATTGTTGAAGCTGAGGATGTTGATCAATCAAAGAATAATAATACAACCAAGAACAAGAAGGACCGAGTGGTATGGTCAACAGAACTGCATAGTGCATTTTTGGACGCTATCAATAAACTTGGACATGCTAATGCTGTGCCAAAGAAAATTCTTCAACTCATGAATATCCCTGGTTTGGAAAGATATCATGTTGCTAGCCATTTGCAGAAATACAGAAAATTATTGAAGCCTAAACCTGATAGAGTGACAAAGAGAAAGCAACAGAATGCGATGTCATTGGTTGCAGTGAATAGTTCAGGAAATACAGAACCACCTAGGATGTGTGCATGTGGAAGAACTCAGTTGCATCCTTTGCCTGCTACTGTATTGTCAGATTTTCATCCTGGTGTCACTGTTAATACTGTTCCAAGAGGAGAGGAACAATCTGATCCAAATAGACAATTGGCTAATCATTTTCATGCTGAGCAAGCTCTGGCACATGATCATCCTCTTCCAACCTTACCTAACAGTTCCATTCATCAGATTTTTCAACCTCAAAATGATGCGTTCAGACATAGATATAAATTATGGTCTCCATCACCGTTTGTTAGAAATCGGGCCATGGTTCGGAGAGACAACATGCGGCACCTGAGGATGCATCATCATAGCATTTGTCCGGTTAAGTTTCAGTCATCTCCCATGTCGATTTCTGAAAATCCTTTCAGCCAGAATTACAGCTTTGGCATGAGTACTGCCCATGGTTTAATATCATCTCAATCCGTTCGGAATTCGGTGGGTGGTGTTGAAATCCGAGGTGAAAACAACACAGGTGAAGCCATTCAGAATCAATATACTACTAGAACTTCCATCTTCCCAAAGCTTCACGAGGAAGGTTCGTCAAGTGGTGCTGTGAGATCTTATGACGCATCAGTGTTTGATCCACAAGTTCCCAATGCTAAAAGACATCACGAGGCCTGA 1179 0.4114 MSSDESKVSAARAFTLGACDYWVKPLNELMFQTVWTHVYRKNFNEKMKQKDVASLKDDNEKRGMNDDTEVASSSIVEAEDVDQSKNNNTTKNKKDRVVWSTELHSAFLDAINKLGHANAVPKKILQLMNIPGLERYHVASHLQKYRKLLKPKPDRVTKRKQQNAMSLVAVNSSGNTEPPRMCACGRTQLHPLPATVLSDFHPGVTVNTVPRGEEQSDPNRQLANHFHAEQALAHDHPLPTLPNSSIHQIFQPQNDAFRHRYKLWSPSPFVRNRAMVRRDNMRHLRMHHHSICPVKFQSSPMSISENPFSQNYSFGMSTAHGLISSQSVRNSVGGVEIRGENNTGEAIQNQYTTRTSIFPKLHEEGSSSGAVRSYDASVFDPQVPNAKRHHEA 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00737 392 MobiDBLite consensus disorder prediction 51 93 - -
Spst3g00737 392 FunFam Two-component response regulator 90 152 - -
Spst3g00737 392 MobiDBLite consensus disorder prediction 51 67 - -
Spst3g00737 392 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 91 150 IPR017930 -
Spst3g00737 392 NCBIfam myb-like DNA-binding domain, SHAQKYF class 94 147 IPR006447 GO:0003677
Spst3g00737 392 Gene3D - 90 151 - -
Spst3g00737 392 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 7 320 IPR044841 GO:0003700|GO:0006355
Spst3g00737 392 MobiDBLite consensus disorder prediction 68 83 - -
Spst3g00737 392 Pfam Myb-like DNA-binding domain 96 146 IPR001005 -
Spst3g00737 392 SUPERFAMILY Homeodomain-like 93 150 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00737 Spst-Chr3 10971923 10973354 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00737 1 183 Response Regulator Gene Family AT2G01760 34.450 1.93e-28 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Spst3g00737 Myb_DNA-binding 3.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00737 - - var:108339502 244.202