Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00736 ATGGCAAAAAATTATTCTGAGAGAGATCTTAAAAACCCAACTAGTCTTAGGATCCTTGCGATTGACAATGACCCCACAGTTCTTGAACTCATCAAGAATGGATGCAACAGATATTCTTATGAAGTAATGACATTCTCTGAGACTCTTCCTGCTGTGGATGTTTTGCGGGGAAGCAAAGACCAGTTTAATTTGATACTCGTGGATGTTCATATGCCAGAGATGGATGGCCATGAATTCCTACGATTTGTCAAACAGGAGAACATTTTTGCTCCTGTAATCGGTGTGTAA 288 0.3993 MAKNYSERDLKNPTSLRILAIDNDPTVLELIKNGCNRYSYEVMTFSETLPAVDVLRGSKDQFNLILVDVHMPEMDGHEFLRFVKQENIFAPVIGV 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00736 95 ProSiteProfiles Response regulatory domain profile. 17 95 IPR001789 GO:0000160
Spst3g00736 95 PANTHER TWO-COMPONENT RESPONSE REGULATOR 16 92 IPR045279 GO:0009736
Spst3g00736 95 SUPERFAMILY CheY-like 14 93 IPR011006 -
Spst3g00736 95 Gene3D - 4 95 - -
Spst3g00736 95 Pfam Response regulator receiver domain 18 93 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00736 Spst-Chr3 10971467 10971857 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00736 13 93 Response Regulator Gene Family AT4G31920 38.272 1.84e-13 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Spst3g00736 Response_reg 2.6e-12 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00736 - K14491 var:108330470 87.4261