Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00735 ATGGCCAAATATTATTCTGAGAAATCCCCAACAGCTCTTACTATCCTTGCCATTGACAAAGACCCCGAAGTTCTTGAACTCATCAAGAAAGGATGCAACAAATATTCTTACGAAGTAATGACATTCACTGATACCCTTCCTGCTGTGGATGTTTTGCGGGGAAACCGAGATGACTTTAACTTGATACTCATGGACCTTCATATGCCAGGGATGGACGGCTATGAATTCCTAAGATTTGTCAGAAGGGAGGAATTTTTTGCTCCTGTAATCGTGATGTCTTCGGAAGAGAATAGGCTTTCTGCAGGGATGGCTTTTCTTCTTGGAGCTTGTGATTATTGGGTTAAGCCTTTGGGTGAGTATCTGTTCCAGACTGTGTGGACACATGTTTATAGGAAGTACTTGAATGAAAAGAGGAAGCAAAAAGATAATGAGAAGTTGGAAGATGATAATCAGAAAAGAGAGACGAATGAGGATGCTGTAGTTGTTTCTTCTGTTGGTGAAACACCTTCCAGTGAAGATGGTGATGTTATTGAATCAAATAAGAGTGGTCCTGTTAACCCACAGTTACCATCAGCGGGCTCATCCAGGCCTCAAAGACGGACCAAAACCAAAAATCGCAAAGGGAAGTAG 630 0.419 MAKYYSEKSPTALTILAIDKDPEVLELIKKGCNKYSYEVMTFTDTLPAVDVLRGNRDDFNLILMDLHMPGMDGYEFLRFVRREEFFAPVIVMSSEENRLSAGMAFLLGACDYWVKPLGEYLFQTVWTHVYRKYLNEKRKQKDNEKLEDDNQKRETNEDAVVVSSVGETPSSEDGDVIESNKSGPVNPQLPSAGSSRPQRRTKTKNRKGK 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00735 209 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 162 IPR045279 GO:0009736
Spst3g00735 209 Pfam Response regulator receiver domain 15 118 IPR001789 GO:0000160
Spst3g00735 209 Coils Coil 134 156 - -
Spst3g00735 209 ProSiteProfiles Response regulatory domain profile. 14 130 IPR001789 GO:0000160
Spst3g00735 209 MobiDBLite consensus disorder prediction 140 156 - -
Spst3g00735 209 MobiDBLite consensus disorder prediction 140 209 - -
Spst3g00735 209 Gene3D - 12 155 - -
Spst3g00735 209 SUPERFAMILY CheY-like 13 166 IPR011006 -
Spst3g00735 209 MobiDBLite consensus disorder prediction 157 198 - -
Spst3g00735 209 SMART REC_2 13 125 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00735 Spst-Chr3 10968207 10968980 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00735 10 134 Response Regulator Gene Family AT1G49190 32.800 1.96e-19 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Spst3g00735 Response_reg 2.8e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00735 - K14491 vun:114178133 142.895