Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00734 ATGAGTCATGGTTCTGAATTTGTTAATAATTCTGATTTTGCTTCTTCTTCAGTCGTTGCAAAGAATTCCAGGGAAGCTTGTGATTTTGCTTCTTCTTCAGTCGTTGCAGAGAATTCCAGGGAAGCTCGTGATTGTGACGAACCAAAGAATAGTGATCTGCCATCGGAGAATAATAGTCATCAACCTAAAAAGAAGTCCCGTTTAGTATGGTCGACGGAACTGCACCTTCGGTTTCTTAATGCTATCAAACAAATTGGACTTTCCAGGGCTGTTCCAAAGAAAATTCTTGAAGTCATGAATGTCTCTTATTTGGAAAGAACACACGTTGCTAGCCATTTGCAGAAGTACAGAAAATTTTTGAAGGCGAAATCTGATAAAGTGATAAAGAGACGGCCAAAGGATGAAAAGTCATTGGTTTGTGTGAATACTTCAGAGAATTCAGAACCACTTGGGATGGGTGCATATGGAAGAATTCCCTTACAATCTCTCCCTTCTAATAGAAGACCTCCTCTTCATCCTTGTACCACTGGTAATATGGTACCAAAAAGGAACCAACAATACGATCCAAATATACAATTGACTAATAATTTTCATACAGAACAAAAGTTGGCACATGCTCCTCCTCTGCCACCCTTTCCTAACACTAACACTCCCCATAATTTTCGACAGTCCATGGGGACTCTAGACCAGGCATCTAGATATGGAGTATGGCCTCCATCTCATACAGTTTTAGTTGAAAATCAGTCTATGCTTCAGAGAAATAATATTCATCAGTCAATGATGCATCCTCCTCCGATTCATCCAATCAATTTTCAGTCATCTTCCATGATTTTCCGTGAAAACCCTTTCACCCAGAATCACTGCTTTGGCATGAATGTTGATCATAGTTTGTTACCTCCTCAATCCAGTAGAAACTCAGTTGGTTTTGTTCAGAGTCAAGGTGGAAACAACACAAATGAAGCCATTCTCAGTCGGTTTGCTGCTGTTTACCCGCATAAAAATGCGGGTTTGCAAAGTGCTGCTGTGAGATCTTATGCTGCATCAATGTTTGATACACAAGTTCCCTATGATTCTGCAAGTTATTTTAGCAATCAACATTTCTCCACAAATATTGTTGAGAAAACAATCAATGATACTTGA 1140 0.3939 MSHGSEFVNNSDFASSSVVAKNSREACDFASSSVVAENSREARDCDEPKNSDLPSENNSHQPKKKSRLVWSTELHLRFLNAIKQIGLSRAVPKKILEVMNVSYLERTHVASHLQKYRKFLKAKSDKVIKRRPKDEKSLVCVNTSENSEPLGMGAYGRIPLQSLPSNRRPPLHPCTTGNMVPKRNQQYDPNIQLTNNFHTEQKLAHAPPLPPFPNTNTPHNFRQSMGTLDQASRYGVWPPSHTVLVENQSMLQRNNIHQSMMHPPPIHPINFQSSSMIFRENPFTQNHCFGMNVDHSLLPPQSSRNSVGFVQSQGGNNTNEAILSRFAAVYPHKNAGLQSAAVRSYAASMFDTQVPYDSASYFSNQHFSTNIVEKTINDT 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00734 379 MobiDBLite consensus disorder prediction 31 66 - -
Spst3g00734 379 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 21 313 IPR044841 GO:0003700|GO:0006355
Spst3g00734 379 NCBIfam myb-like DNA-binding domain, SHAQKYF class 65 118 IPR006447 GO:0003677
Spst3g00734 379 SUPERFAMILY Homeodomain-like 63 121 IPR009057 -
Spst3g00734 379 MobiDBLite consensus disorder prediction 39 66 - -
Spst3g00734 379 FunFam Two-component response regulator 61 124 - -
Spst3g00734 379 Pfam Myb-like DNA-binding domain 69 117 IPR001005 -
Spst3g00734 379 Gene3D - 62 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00734 Spst-Chr3 10965717 10967230 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00734 25 121 Response Regulator Gene Family AT3G16857 48.039 4.50e-19 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Spst3g00734 Myb_DNA-binding 9.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00734 - K14491 var:108339502 171.785