Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00718 ATGGGGAAGTATGAACTAGGTTTTGGAAGTCTCTCCCTTTTTTATCTTATTTTGGTTTTTTCTTTCCTTGTTATCTCGATTAGGTGTCAAGATGCAGAGATAATGGGAATTTTAAAGAACGCGATTAATGTCCCTGATAACTTCCAATGGACAGGTCAAGATGTATGCAAATGGAGACGTGTTACATGTGACTCATCTAAACGTGTGAAAGCTATTCAGATTGGGAATCAAAATCTCCAAGGATCTCTCCCGAAGGAGCTTGTGAAGTTAACAACTTTGACACGTTTTGAGTGTCAAAACAATAATCTTTCAGGGTCGTTCCCCTACCTCTCAAAATCCTTGCAGAAGTTGATCATCCATGACAACAACTTTAATTTCATTCCTGGTGATTTCTTCAAAGGTATGAGCAATTTGCAAGAGGTGAAAATTGATGACATCCCATTCTCTCAATGGCACATTCCTAACACCCTTAAGGACTGTGTCTCACTCCAAACTTTTACTGCTCAGAGTACTGGCCTTAGTGGGACAATCCCAGACTTTTTTGGTAGTGATGGTCCCTTTGCAGGTTTGGTTGTCTTAGCTTTGTCTGATAATTTTCTAGAAGGTGCATTGCCTGCAAGTCTCTCAGGTAGCTCAATAGAGAATCTTTTGGTGCATGGACAGAATAGTAACTCTAAACTCAATGGCACCCTTGCGGTGTTAAGCAACATGAAATCTTTGACGCAAATTTGGGCTAATGGGAATGCATTCACTGGTCCTATACCAGATCTATCAAAACATGATCAACTTTATGATGTGAACCTAAGGGATAACCAGTTGACTGGTGTTGTTCCACCCTCCCTTGTTGCTTTACCACGTTTGAAGTTTGTCAACTTAACCAATAACCTTCTTCAAGGATCCCCTCCTAGGTTCAAAGATGGGGTAGGAGTTGACAATAACATGGATAAGGGGAGAAATCAATATTGCACAAATGTATTAGGACAACCATGTAGTCCCCTTGTAAATGTTTTACTATCTGTTGTTAAACCCTTGGGTTATCCTCTAAAATTTGCTCAAAGTTGGCAAGGTAATGATCCATGTGCTAATGAGTGGACAGGTATAGTTTGTTCTGGGGGAAATATTTCAGTTATCAACTTTCAAAACATGGGTTTGTCTGGCACTATTTGTCCATGTTTTGTCGGTCTTACTTCAGTGACAAAATTATTTCTTTCTAACAATAGTCTCACTGGCACCGTACCGAATGAACTTACTAGTTTGCCTCTTTTGCAAGAGTTAGATGTTTCCAATAATAATTTATATGGCAAAGTGCCGTCATTTCGTAAAGGCGTGGTTTTTAAATATGAAGGGAATCCTGATATAGGAAAGGATAAACCGACTAAATTGAGGTCTGGAGACAATCATGGCAATCATAATAACAATAATACTGGAGTAATTATTGGAATTATAGTGGTGGTTCTTCTTGTACTTATTGTCGGGGTTTTAATACTTGTTAAGTTTAGGAGAAAGTGGAAGTATATGGGTAAAGTTCAAAACCCAACCAAAATTGTGGCACCTCCCAATAATGGGGATGGAAATGTTGCAAAGATAAGTGGTGGAGGTTATGGGGAAGGAAATGTTAGTTCATTATTAAGTCCCAGGCATAGTGTTTATCAGGGAGAAGGAAGTAAAATGTTAATTTCAATCCAAATTTTGAAAGAAGTTACCAACAATTTTAGTGAAGAAAACATATTGGGTAAAGGGGGATTTGGTACAGTATACAAAGGGGAATTACATGATGGGACAAAGATTGCAGTGAAAAGGATGCAATCAGCAGGACTAGTGGATCAAAAAGGGTTAAGTGAGTTCACAGCTGAAATTGCAGTGCTAACCAAAGTTCGACATAGAAATTTGGTTGCACTTTTGGGTTTTTGCTTGGATGGAAGTGAGAGACTTCTTGTGTATGAATACATGCCTCAAGGTGCTCTTAGTAAACATTTGATTAATTGGAAAGATGAAGAGTTAAAACCACTTGAATGGAAAACAAGACTTAGTATTGCCTTAGATGTAGCTAGAGGTGTTGAATATCTTCATGGTTTGGCACAACAAATTTTTATTCACAGGGATCTCAAACCATCCAACATTTTGCTTGGAGATGATATGCGTGCCAAAGTATCAGACTTTGGATTGGTTCGACTGGCTCCTGAAGGGAAAACCTCATTTCAAACTAGATTGGCAGGAACTTTTGGATACATGGCACCAGAATATGCAGCTACTGGACGACTTACAACAAAGGTTGATGTGTATAGTTTTGGAGTGATTCTTATGGAGATGATAACAGGAAGGAAAGCACTTGATGATAGCCTCCCAGAAGATAAAATCCACCTTGTTACATGGTTTCGTAAGATGCTAATGAACAAAGATTCATTCCAAACAATCATTGACCCAACAATAGAAGTTGATAAGGAAACCTTAGTCAGTATAAGTACTGTTGCAGGGTTAGCAGGACATTGTTGTGCTAGGGAGCCTTACCAACGTCCTGACATGAGTCATGTGGTGAATGTGTTGTCACCTCTTGTTGAGGTGTGGAAGCCTTCAGAAACACATGTTGATGACATATATGGCATTGACTTTGATATTACTTTACCAGAAGCACTCCAACAATGGAAAGAACATGAGGGAAACACCAACACCTTTGAGCCAGCTTCTTCATCAGCACATGTTAATGGAAACAACACGAAATCGAGTTCTCTTACTCCTCAGATGGACAATGATGGCAAAAGCCATCGACATCAACTTTAA 2778 0.3902 MGKYELGFGSLSLFYLILVFSFLVISIRCQDAEIMGILKNAINVPDNFQWTGQDVCKWRRVTCDSSKRVKAIQIGNQNLQGSLPKELVKLTTLTRFECQNNNLSGSFPYLSKSLQKLIIHDNNFNFIPGDFFKGMSNLQEVKIDDIPFSQWHIPNTLKDCVSLQTFTAQSTGLSGTIPDFFGSDGPFAGLVVLALSDNFLEGALPASLSGSSIENLLVHGQNSNSKLNGTLAVLSNMKSLTQIWANGNAFTGPIPDLSKHDQLYDVNLRDNQLTGVVPPSLVALPRLKFVNLTNNLLQGSPPRFKDGVGVDNNMDKGRNQYCTNVLGQPCSPLVNVLLSVVKPLGYPLKFAQSWQGNDPCANEWTGIVCSGGNISVINFQNMGLSGTICPCFVGLTSVTKLFLSNNSLTGTVPNELTSLPLLQELDVSNNNLYGKVPSFRKGVVFKYEGNPDIGKDKPTKLRSGDNHGNHNNNNTGVIIGIIVVVLLVLIVGVLILVKFRRKWKYMGKVQNPTKIVAPPNNGDGNVAKISGGGYGEGNVSSLLSPRHSVYQGEGSKMLISIQILKEVTNNFSEENILGKGGFGTVYKGELHDGTKIAVKRMQSAGLVDQKGLSEFTAEIAVLTKVRHRNLVALLGFCLDGSERLLVYEYMPQGALSKHLINWKDEELKPLEWKTRLSIALDVARGVEYLHGLAQQIFIHRDLKPSNILLGDDMRAKVSDFGLVRLAPEGKTSFQTRLAGTFGYMAPEYAATGRLTTKVDVYSFGVILMEMITGRKALDDSLPEDKIHLVTWFRKMLMNKDSFQTIIDPTIEVDKETLVSISTVAGLAGHCCAREPYQRPDMSHVVNVLSPLVEVWKPSETHVDDIYGIDFDITLPEALQQWKEHEGNTNTFEPASSSAHVNGNNTKSSSLTPQMDNDGKSHRHQL 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00718 925 FunFam Receptor-like kinase TMK4 29 327 - -
Spst3g00718 925 Pfam Leucine rich repeat 392 432 IPR001611 GO:0005515
Spst3g00718 925 ProSiteProfiles Protein kinase domain profile. 571 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00718 925 CDD STKc_IRAK 577 851 - -
Spst3g00718 925 SMART serkin_6 571 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00718 925 Gene3D Phosphorylase Kinase; domain 1 541 649 - -
Spst3g00718 925 SUPERFAMILY L domain-like 334 439 - -
Spst3g00718 925 SUPERFAMILY L domain-like 31 304 - -
Spst3g00718 925 FunFam receptor protein kinase TMK1 650 867 - -
Spst3g00718 925 FunFam receptor protein kinase TMK1 535 649 - -
Spst3g00718 925 MobiDBLite consensus disorder prediction 884 925 - -
Spst3g00718 925 MobiDBLite consensus disorder prediction 884 915 - -
Spst3g00718 925 SUPERFAMILY Protein kinase-like (PK-like) 550 848 IPR011009 -
Spst3g00718 925 Pfam Leucine rich repeat N-terminal domain 38 64 IPR013210 -
Spst3g00718 925 Pfam Leucine rich repeat N-terminal domain 336 370 IPR013210 -
Spst3g00718 925 ProSitePatterns Serine/Threonine protein kinases active-site signature. 697 709 IPR008271 GO:0004672|GO:0006468
Spst3g00718 925 Gene3D Ribonuclease Inhibitor 29 328 IPR032675 -
Spst3g00718 925 PANTHER OSJNBA0070M12.3 PROTEIN 15 898 - -
Spst3g00718 925 FunFam Leucine-rich repeat receptor-like kinase 332 456 - -
Spst3g00718 925 Gene3D Ribonuclease Inhibitor 333 457 IPR032675 -
Spst3g00718 925 Pfam Protein kinase domain 572 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00718 925 ProSitePatterns Protein kinases ATP-binding region signature. 577 599 IPR017441 GO:0005524
Spst3g00718 925 Gene3D Transferase(Phosphotransferase) domain 1 650 866 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00718 Spst-Chr3 10730847 10734041 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00718 71 848 Receptor kinase-like Gene Family AT5G07280 32.818 1.82e-85 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Spst3g00718 Pkinase 9.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00718 K00924 - gmx:100788903 1420.6