Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00692 ATGATAGATATTGAGGAGGACATCCGTTCTTTACAGCTCGAGTCAGCAGAAGACAATAATGGGGTGGTGAATCCTGAGGATGGAAAGCCGGAAGAAGTTGAAAAATCTGATCAGATGGATGAAGATCCTAAGCAGGAGGTTCAGGCACAGGCTGCTGAGGCTGAGCCAAAAGTGAAAGATAAGGAGATTCTTCCTGTTCAAGAAGAAGAAGAAGAGGAGCCAGAAATGACCAAAAGGCACCTGAATGTTGTGTTTATTGGCCATGTTGATGCTGGTAAGTCTACAACTGGAGGCCAGATACTTTTCCTCAGTGGTCAGGTTGATGAACGGACCATCCAAAAATATGAGAAAGAGGCTAAGGATAAAAGTCGAGAAAGTTGGTATATGGCTTATATAATGGACACAAATGAGGAGGAGAGGGTAAAGGGAAAAACAGTTGAAGTTGGACGAGCACATTTTGAAACAGACACAACAAGGTTTACTATTTTGGATGCGCCTGGTCACAAAAGCTATGTTCCTAACATGATCAGTGGTGCGTCTCAAGCTGATATTGGAGTGCTGGTTATTTCTGCTCGGAAGGGAGAATTTGAAACTGGATATGAGAGAGGTGGGCAAACTCGTGAGCATGTCCAGCTTGCAAAAACGCTGGGTGTGTCTAAGCTGCTTGTTGTTGTTAATAAAATGGACGAACCTACAGTACAGTGGTCAAAAGAAAGGTTCTCCCACTTTCTTGGTCTATTCACACACATCCTTTTTGTGCTTGTATGCAATTATAACGAGATTCCTTGCTGCTGCTGTACCACTAGGTATGAGGAAATTGAGTCGAAGATGGTTCCATTTTTAAAGCAATCTGGATACAATGTAAAGAAAGTTATTTTACTAATTATTTGTTCAACAGATGTCTTGTTTTTGCCTATATCTGGTCTAGTGGGTACAAACATGAAAACAAGAGTGGACAAAAGTGTTTGTCCATGGTGGAATGGGCCTTGCTTGTTTGAGGCCCTTGATGCTATTGAAGTTCCACCACGAGATCCCAAAGGTCCTTTCAGGATGCCCATTATTGACAAATTCAAAGACATGGGAACTGTTGTTATGGGGAAAGTTGAATCCGGTACTGTCCGCGAGGGAGATTCCTTGTTGGTCATGCCAAATAAGGATCAAGTAAAAGTTGTTGCCATATTCATTGACGAGGATCGTGTTAAACGAGCTGGACCTGGTGAAAATTTGCGGATTAGATTATCCGGTGTTGAAGAAGAAGACATATTATCTGGCTTTGTCCTGTCTAGTGTTGCTACTCCAATACCAGCAGTTACTGAGTTTGTTGCTCAGTTGGTGATCCTTGAATTGCTAGACAATGCTATTTTTACTGCTGGGTACAAGGCTGTTCTGCATATCCACTCGGTGGTTGAGGAATGTGAGATAGTTGAACTTATACAGCAAATTGATACAAAGACAAAGAAGCCTTTGAAAAAGAAAGTTCTCTTTGTGAAGAATGGTGCAGTTGTAGTGTGCCGTGTTCAGGTTAATAACTCTATTTGCATCGAGAAGTTCTCTGATTTCCCGCAGCTTGGGAGGTTCACTCTTCGTACTGAAGGAAAAACTGTTGCCGTGGGAAAAGTCATTGGTCTGTGA 1632 0.4222 MIDIEEDIRSLQLESAEDNNGVVNPEDGKPEEVEKSDQMDEDPKQEVQAQAAEAEPKVKDKEILPVQEEEEEEPEMTKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETDTTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLLVVVNKMDEPTVQWSKERFSHFLGLFTHILFVLVCNYNEIPCCCCTTRYEEIESKMVPFLKQSGYNVKKVILLIICSTDVLFLPISGLVGTNMKTRVDKSVCPWWNGPCLFEALDAIEVPPRDPKGPFRMPIIDKFKDMGTVVMGKVESGTVREGDSLLVMPNKDQVKVVAIFIDEDRVKRAGPGENLRIRLSGVEEEDILSGFVLSSVATPIPAVTEFVAQLVILELLDNAIFTAGYKAVLHIHSVVEECEIVELIQQIDTKTKKPLKKKVLFVKNGAVVVCRVQVNNSICIEKFSDFPQLGRFTLRTEGKTVAVGKVIGL 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00692 543 CDD eRF3_C_III 435 543 - -
Spst3g00692 543 CDD eRF3_II 348 429 - -
Spst3g00692 543 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 78 343 IPR000795 GO:0003924|GO:0005525
Spst3g00692 543 PANTHER TRANSLATION FACTOR 267 541 - -
Spst3g00692 543 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 345 431 - -
Spst3g00692 543 CDD EF1_alpha 82 342 - -
Spst3g00692 543 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 134 149 IPR031157 -
Spst3g00692 543 Pfam Elongation factor Tu domain 2 361 427 IPR004161 GO:0005525
Spst3g00692 543 SUPERFAMILY Translation proteins 340 432 IPR009000 -
Spst3g00692 543 PRINTS GTP-binding elongation factor signature 82 95 IPR000795 GO:0003924|GO:0005525
Spst3g00692 543 PRINTS GTP-binding elongation factor signature 161 171 IPR000795 GO:0003924|GO:0005525
Spst3g00692 543 PRINTS GTP-binding elongation factor signature 221 230 IPR000795 GO:0003924|GO:0005525
Spst3g00692 543 PRINTS GTP-binding elongation factor signature 177 188 IPR000795 GO:0003924|GO:0005525
Spst3g00692 543 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 352 IPR027417 -
Spst3g00692 543 Pfam Elongation factor Tu C-terminal domain 434 541 IPR004160 -
Spst3g00692 543 Gene3D - 60 341 IPR027417 -
Spst3g00692 543 Gene3D Translation factors 346 431 - -
Spst3g00692 543 MobiDBLite consensus disorder prediction 1 77 - -
Spst3g00692 543 FunFam Putative translation elongation/initiation factor family protein 435 543 - -
Spst3g00692 543 Gene3D Translation factors 433 543 - -
Spst3g00692 543 Pfam Elongation factor Tu GTP binding domain 78 315 IPR000795 GO:0003924|GO:0005525
Spst3g00692 543 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 437 542 IPR009001 -
Spst3g00692 543 MobiDBLite consensus disorder prediction 24 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00692 Spst-Chr3 10362326 10373594 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00692 78 538 Eukaryotic Initiation Factors Gene Family AT5G60390 34.483 3.61e-88 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00692 K03267 - gmx:100793653 899.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00692 3 10362326 10373594 Spst3g00692 3 10362326 10373594 ECH