Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00682 ATGTGGTGGCCCAAGGCGGAGGAACCCAGTTGGGTAAAGTCTTCGTCTTGGTTCAAGAGATTTGAAGGAACGACGCAGCCCATCACTGTGTGTGGAGTTTTTGAACTGAAACTGAAGAAAACGAAAAAGAAAGTGGAGGAGAAGCCACACCCCCAAATCTCCGTTCCCAAATGGATGGGTCATTTGTACCTTTCGTTTGCACTGTCAGTTTCTGGAGATTTGACAACTTTAGCCAATCAATTGGAAGAATTGCTTCCATGGATTATTCATAGAAGTGAAATGTACTATGCTCTAGCCTTTTGTTATTATGGAGCAGGCAAGGATCTAGTAGCACTAGATCTTTATTTTGAATATGAAATTGGAGTCGCGAACACTGGTCGTCGTGCCTGCAAACGCCCGATGCCAAGTGCTCCGCTATTTCCACACATAAACCACAACTCCTTCGTCCACCTCTTAAACCTCATGCAATTGGATCTCCGCACCAACGTTATCGCTGACGACCAACAGGACGACGCGCCTTTGCAACGCCGCTGGTGCTTCTTGCAATGTCGCTTGTGA 558 0.4659 MWWPKAEEPSWVKSSSWFKRFEGTTQPITVCGVFELKLKKTKKKVEEKPHPQISVPKWMGHLYLSFALSVSGDLTTLANQLEELLPWIIHRSEMYYALAFCYYGAGKDLVALDLYFEYEIGVANTGRRACKRPMPSAPLFPHINHNSFVHLLNLMQLDLRTNVIADDQQDDAPLQRRWCFLQCRL 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00682 185 PANTHER PROTEIN NPG1 63 114 IPR043376 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00682 Spst-Chr3 10250129 10254960 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00682 63 114 Calmodulin-binding Proteins AT4G28600 55.769 1.48e-13 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00682 K21843 - gmx:100800762 92.4337