Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00679 ATGGGTGGTGGAGGAACGCTCGTGGAAGGGCTTCGACGCTTCTTTCAACGACGCGCTTCTAGTGCTGAGAACCAACACAATGCCAACAATAGCCGCGTCCACGTGAGAGATTTGCGCTCGCAATTGGCTTCCATTCCCAACCACGACCTCATTGTCGACCCTGATTTCGATTTCTCTACCTTGAAGCCCATCAAAGTCCCGGCACAAATCCCCTTCAGACCCTCTGCCATGGATCATCACAAAAAGGGTGCCCCAGAGGCAGAGTTTTTTACTGAGTATGGAGAGGCAAGTCAATACCAAATTCAAGAGGTTGTTGGAAAAGGAAGTTACGGTGTTGTGGGTTCTGCCGTTGATGCTCACACCGGTGAAAGGGTTGCAATCAAGAAAATTAATGATGTTTTTGAGCATGTATCCGATGCCACACGGATCCTTAGAGAAATTAAGCTCTTGCGGTTGCTTAGGCATCCTGATATCGTGGAAATTAAGCATATTATGCTTCCTCCTTCCCGGAGAGAGTTCAGGGATATCTATGTTGTGTTTGAGTTGATGGAATCTGATCTCCATCAAGTAATCAAGGCCAATGATGATCTTACTCCTGAGCACCACCAGTTCTTCTTGTACCAACTTCTTAGGGGCCTGAAATATATTCATACAGCAAACGTGTTTCATCGTGATTTGAAGCCAAAAAATATTCTTGCTAACGCTGACTGCAAACTAAAAATTTGCGATTTTGGGCTTGCTCGAGTTTCATTCAATGATGCTCCATCAGCTATATTCTGGACTGATTATGTTGCAACTCGGTGGTACCGTGCACCGGAATTATGTGGTTCTTTTTTCTCAAAATACACCCCTGCAATTGATATATGGAGCATTGGATGCATATTTGCAGAAATGCTCACTGGGAAGCCATTGTTTCCTGGGAAAAATGTAGTGCACCAATTGGATCTCATGACTGATTTGCTTGGCACTCCTCCTCCCGAGTCCATTGCAAGGATTCGAAATGAAAAGGCTAAAAGGTATCTCAATGGCATGAGAAAAAAGCAACCAGTTCCACTTTCCCAAAAATTTCCAAATGCAGATCCATTGGCTCTTCGTCTTCTGGAGCGCCTACTTGCATTTGATCCTAAAGACCGTCCATCAGCTGAAGAGGCATTAGCTGATCCTTACTTCATTGGTTTGGCGAACATAGACCGTGAACCTTCCACACAACCCATTTCAAAAATTGAGTTTGAATTTGAGAGAAGGAAATTGACCAAAGATGATGTTAGAGAGTTGATTTATCGAGAGATTTTGGAGTATCATCCCCAAATGCTCCAGGAGTATCTTCGTGGTGGAGATCAAACTAGCTTCATGTATCCAAGTGGGGTTGATCGGTTCAAAAGACAGTTTGCACATCTTGAGGAGCATTATGGGAAAGGTGAACGAAGCACTCCATTGCAGAGACAGCACGCCTCCTTACCTAGAGAGAGAGTTTGTGCTCCCAAGGATGAAAGTGAAGAAAACAGCGATTTTGAAAAGCCAAGTGGATCAAATCTACAGAGTCCTCCAGGGTCTGATACGACCAGTGCTCAAAATGGAACCTCCAAACCAAACTACAGTGCTCGCAGTTTGTTAAAGAGTGCCAGTATTAGTGGTTCAAAGTGTGTAGTTGTGAAACAAAATAAAGATTCAGAGCAAGAGGCAATTAGGGAGATAAATGATGAGACGGTGGATGCAGTGATGGAGTGA 1728 0.4416 MGGGGTLVEGLRRFFQRRASSAENQHNANNSRVHVRDLRSQLASIPNHDLIVDPDFDFSTLKPIKVPAQIPFRPSAMDHHKKGAPEAEFFTEYGEASQYQIQEVVGKGSYGVVGSAVDAHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPPPESIARIRNEKAKRYLNGMRKKQPVPLSQKFPNADPLALRLLERLLAFDPKDRPSAEEALADPYFIGLANIDREPSTQPISKIEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLRGGDQTSFMYPSGVDRFKRQFAHLEEHYGKGERSTPLQRQHASLPRERVCAPKDESEENSDFEKPSGSNLQSPPGSDTTSAQNGTSKPNYSARSLLKSASISGSKCVVVKQNKDSEQEAIREINDETVDAVME 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00679 575 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 98 442 - -
Spst3g00679 575 Gene3D Transferase(Phosphotransferase) domain 1 185 413 - -
Spst3g00679 575 ProSiteProfiles Protein kinase domain profile. 99 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00679 575 Pfam Protein kinase domain 99 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00679 575 FunFam Mitogen-activated protein kinase 414 436 - -
Spst3g00679 575 ProSitePatterns Protein kinases ATP-binding region signature. 105 129 IPR017441 GO:0005524
Spst3g00679 575 SUPERFAMILY Protein kinase-like (PK-like) 95 394 IPR011009 -
Spst3g00679 575 FunFam Mitogen-activated protein kinase 185 413 - -
Spst3g00679 575 SMART serkin_6 99 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00679 575 CDD STKc_TDY_MAPK 98 435 - -
Spst3g00679 575 MobiDBLite consensus disorder prediction 553 575 - -
Spst3g00679 575 MobiDBLite consensus disorder prediction 505 537 - -
Spst3g00679 575 ProSitePatterns MAP kinase signature. 134 237 IPR003527 GO:0004707|GO:0005524|GO:0006468
Spst3g00679 575 FunFam Mitogen-activated protein kinase 89 193 - -
Spst3g00679 575 Gene3D Phosphorylase Kinase; domain 1 115 436 - -
Spst3g00679 575 MobiDBLite consensus disorder prediction 488 504 - -
Spst3g00679 575 MobiDBLite consensus disorder prediction 551 575 - -
Spst3g00679 575 MobiDBLite consensus disorder prediction 469 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00679 Spst-Chr3 10236344 10240380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00679 1 570 MAP Kinase Gene Family AT1G73670 73.702 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Spst3g00679 Pkinase 1.6e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00679 - - gmx:100780831 1035.02