Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00664 ATGGTTGGTTACAATGAAGGTGGGGAGTTCAACATGCCTGATTATGCACTCAATGGAAGGAAACTCAGGCCTCTGATGCCAAGGCCAGCGAGTTCTCCTAACAACACTTCAAACGCAAACACTCCATGCTTGACCCGCATTCATCATGGCAACGATTTCTTTTCACAATATCACAATCTGGCATCAGTGGCAGATCAGGGAAAGAGAGAGTTCAACCCTCCCCCAGTGGTGGTGAGTTCAAGGTGGAATCCAACCCCGGAGCAGCTAAGGGCATTGGAGGAATTGTATAGAAGAGGGACAAGAACACCATCTGCAGAACAAATCCAACAAATCACGGCACAGCTTAGAAGGTTTGGAAAAATTGAAGGGAAGAATGTCTTCTATTGGTTTCAAAATCACAAAGCGAGAGAAAGACAGAAACGCCGCCGTCAAATGGAGTCGGCTGCTGAGGGTCATCACACCCGTGACTTTGATGGTACTCTTGAAAAGAAAGACTTAGGCGCAAGTAGGACAGTGTTTGAAGTTGAACAGACCAACAACTGGGCACCCTCTTCAAACTGCAGTACGCTTGCAGAGGAATCTGTTTCAATACAAAGGGCAGCAAAAGCAGCGGTTGCAGAGTGTAGAACAGATGGATGGCTCCAATTCGATGAAGGAGAGTTACAACATAGAAGAAACTTAATGGAGAGGAATGCCACGTGGCATATGATGCAGTTATCTTGTCCTCCCCCTCCTACAGTTTCACCCCACCTCATAAACGCTCCTCCTACCATCCCTACTGCTAGCATGGCCACCACACCCACAGTAGCAAGAGTTATGGACCCAAAGCTCATTAAGACTCACGATCTCAGCTTCTTTATTTCACCTAACAGAGAAAACCGTCTTATCCACTTAAGCAGTATCAACACCTACACCCCGGATGATAATTCTGTGGATTCTCAAACCCTTCAACTTTTCCCAATAAGGAACGCTGATGAAGCCAGTGATAACATTGACCACCAAAAGGAGACAGAGGTATCAGTCTCAGCAATGAATGCCCCCAGCCAGTTTTTTGAGTTCCTTCCATTGAAGAGCTGA 1077 0.4643 MVGYNEGGEFNMPDYALNGRKLRPLMPRPASSPNNTSNANTPCLTRIHHGNDFFSQYHNLASVADQGKREFNPPPVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESAAEGHHTRDFDGTLEKKDLGASRTVFEVEQTNNWAPSSNCSTLAEESVSIQRAAKAAVAECRTDGWLQFDEGELQHRRNLMERNATWHMMQLSCPPPPTVSPHLINAPPTIPTASMATTPTVARVMDPKLIKTHDLSFFISPNRENRLIHLSSINTYTPDDNSVDSQTLQLFPIRNADEASDNIDHQKETEVSVSAMNAPSQFFEFLPLKS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00664 358 FunFam WUSCHEL-related homeobox 4 79 146 - -
Spst3g00664 358 SMART HOX_1 77 144 IPR001356 GO:0003677
Spst3g00664 358 ProSiteProfiles 'Homeobox' domain profile. 85 140 IPR001356 GO:0003677
Spst3g00664 358 MobiDBLite consensus disorder prediction 141 159 - -
Spst3g00664 358 CDD homeodomain 81 141 IPR001356 GO:0003677
Spst3g00664 358 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 66 351 IPR044555 GO:0003700|GO:0099402
Spst3g00664 358 MobiDBLite consensus disorder prediction 138 159 - -
Spst3g00664 358 MobiDBLite consensus disorder prediction 21 41 - -
Spst3g00664 358 Gene3D - 78 140 - -
Spst3g00664 358 Pfam Homeodomain 80 139 IPR001356 GO:0003677
Spst3g00664 358 SUPERFAMILY Homeodomain-like 80 146 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00664 Spst-Chr3 10077985 10080069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00664 2 358 Wox Gene Family AT3G18010 38.560 1.54e-62 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Spst3g00664 Homeodomain 9.6e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00664 - - gmx:100777274 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00664 3 10077985 10080069 Spst3g00664 3 10077985 10080069 ECH