Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00643 ATGGGTGATGTTTCTGATCTTTATTTGATTACAGGAAACAAAGGGGCGGGTAGGACACCACTGAATTGGGAAGTAAGATCAGGCATTGCACTTGGTGCTGCCCGTGGCATTGAGTACCTCCATTCACGAGGGCCTAATGTTTCTCATGGAAATATAAAGTCATCCAACATTCTCTTAACCAAATCATATGATGCCAGAGTGTCTGACTTTGGCCTCGCACACCTTGTTGGCCCCTCCTCTACCCCCAACCGGGTCGCTGGGTACCGTGCACCTGAGGTGACTGATCCTCGCAAGGTGTCTCAGAAGGCAGATGTGTACAGTTTTGGTGTATTGCTCTTGGAACTTCTGACTGGAAAGGCACCTACTCATGCTCTTCTAAATGAGGAAGGAGTGGACCTTCCCAGATGGGTTCAATCTGTGGTAAGGGAAGAGTGGACTTCTGAGGTCTTTGATCTCGAGCTTCTTAGGTATCAGAATGTGGAAGAGGAGATGGTTCAGTTGTTGCAACTTGCAGTTGATTGTGCAGCACAATACCCTGACAAGCGCCCTTCAATGTCTGAAGTGGTAAGGAGCATAGAAGAGTTGCGAAGGTCTAGCTTGAAAGAGGACCAGGACCAAATCCAACATGATTCCGTCAATGATATAGAATTATAA 654 0.4709 MGDVSDLYLITGNKGAGRTPLNWEVRSGIALGAARGIEYLHSRGPNVSHGNIKSSNILLTKSYDARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAQYPDKRPSMSEVVRSIEELRRSSLKEDQDQIQHDSVNDIEL 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00643 217 FunFam Probable inactive receptor kinase At1g48480 1 204 - -
Spst3g00643 217 PANTHER OS05G0588300 PROTEIN 17 199 - -
Spst3g00643 217 Pfam Protein kinase domain 28 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00643 217 SUPERFAMILY Protein kinase-like (PK-like) 16 197 IPR011009 -
Spst3g00643 217 Gene3D Transferase(Phosphotransferase) domain 1 6 216 - -
Spst3g00643 217 ProSiteProfiles Protein kinase domain profile. 1 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00643 Spst-Chr3 9938580 9939233 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00643 1 198 Receptor kinase-like Gene Family AT3G17840 71.287 4.33e-96 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Spst3g00643 Pkinase 3.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00643 - - gmx:100818955 397.512