Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00642 ATGCTGCCTCACAAGCACACTCTCGTGGTTGTGGCGGCCACGCTGGCGCTGATGCTCGCAGCAGCAGATGCAGATCTGGCCGCCGAGCGAGCCGCATTGCTCGCCCTACGTTCTGCAGTCGGCGGCAGAACCCTCTTCTGGAACGCCACCAGGGAGAGCCCCTGCACCTGGGCCGGTGTCCAATGCGAGCGCGACCACGTCGTCGAGCTCCACCTCCCCGGTGTTGCTCTCTCCGGCGAAATCCCCGTGGGAATATTCGGGAACCTGACCCAGCTCCGCACCCTGAGTCTCCGCTTCAACGCGCTGCGGGGTTCCCTACCTTCAGATCTGGCGTCGTGCGTGAACCTGCGGAATCTCTACATTCAGCGGAACCTGCTGAGCGGCGCAATCCCAGCGTTTTTGTTTCAGTTACCGGACTTGGTTCGGTTGAACATGGGCTTCAACAACTTCTCAGGCCCATTTCCCAGCGGCTTCAACAGCCTAACCCGATTGAAGACTTTGTTTGTGGAAAACAACCAGCTCTCGGGCCCAATCCCCGACCTGAGCAAACTCAGTCTGGATCAGTTCAACGTCTCCAACAACCTCCTCAACGGCTCTGTCCCTCTCAAGCTTCAGACATTCCCTCAGGATTCCTTTCTTGGTAACTCCCTCTGTGGTCGCCCACTCTCTCTCTGCCACGGAGATATCGCCGATCCCATCTCCGTCGACAACAACCCCAAGCCCAACAATAACACCACCAACCACAAGTTGTCCGGCGGCGCCATTGCGGGGATTGTTGTTGGATCGGTCGTCTTTCTTCTACTGCTGGTCTTCCTCTTCATTTTCGTGTGCAGGAACAAGACTGGCAAGAAGACCAGCGCTGTCGACATTGCTACTGTGAAACATCCTGAGGCTGAGGCCCAGGTTGTTGCTGAGAAAGGAGTTCCGGATGTTGAGAACGGCGGTCATGCCAACGGCAATTCTGCTGTGGCTGTGGCGGCGGTTGCGGCGGGGAATAAAGCGGAAGGGAACGGTAGTGGGGGAGCGAAAAAGTTGGTATTTTTCGGGAATGCGGCGAGGGCTTTTGATTTGGAGGATTTGCTCAGGGCTTCGGCGGAGGTCTTGGGTAAAGGGACTTTCGGGACGGCGTATAAGGCGGTGCTGGAGGCGGGGCCGGTAGTGGCGGTGAAGAGGTTGAAGGATGTGACGATTTCTGAGAAGGAGTTTAAGGAGAAGATTGAGGCGGTGGGAGCTATGGATCATGAGAGTTTGGTTCCTCTCAGAGCTTACTATTTCAGTAGGGATGAAAAACTCCTCGTCTATGATTACATGCCCATGGGAAGCTTATCTGCACTTTTGCATGGTTCGTCAGCTTTTCCGTTCATTCTCTCTTTTCAGTTTTTTTCTATGCTTTGTTTTCACTCAATTTCGCCCTTTTCCAGTGCTTGGACAATCATTACTTACTGCAATTGA 1452 0.5468 MLPHKHTLVVVAATLALMLAAADADLAAERAALLALRSAVGGRTLFWNATRESPCTWAGVQCERDHVVELHLPGVALSGEIPVGIFGNLTQLRTLSLRFNALRGSLPSDLASCVNLRNLYIQRNLLSGAIPAFLFQLPDLVRLNMGFNNFSGPFPSGFNSLTRLKTLFVENNQLSGPIPDLSKLSLDQFNVSNNLLNGSVPLKLQTFPQDSFLGNSLCGRPLSLCHGDIADPISVDNNPKPNNNTTNHKLSGGAIAGIVVGSVVFLLLLVFLFIFVCRNKTGKKTSAVDIATVKHPEAEAQVVAEKGVPDVENGGHANGNSAVAVAAVAAGNKAEGNGSGGAKKLVFFGNAARAFDLEDLLRASAEVLGKGTFGTAYKAVLEAGPVVAVKRLKDVTISEKEFKEKIEAVGAMDHESLVPLRAYYFSRDEKLLVYDYMPMGSLSALLHGSSAFPFILSFQFFSMLCFHSISPFSSAWTIITYCN 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00642 483 FunFam Probable inactive receptor kinase RLK902 26 182 - -
Spst3g00642 483 Gene3D Ribonuclease Inhibitor 143 225 IPR032675 -
Spst3g00642 483 Pfam Leucine rich repeat 115 174 IPR001611 GO:0005515
Spst3g00642 483 ProSiteProfiles Protein kinase domain profile. 362 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00642 483 SUPERFAMILY L domain-like 47 206 - -
Spst3g00642 483 PANTHER OS05G0588300 PROTEIN 10 452 - -
Spst3g00642 483 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
Spst3g00642 483 Gene3D Ribonuclease Inhibitor 28 137 IPR032675 -
Spst3g00642 483 SUPERFAMILY Protein kinase-like (PK-like) 366 457 IPR011009 -
Spst3g00642 483 Gene3D Phosphorylase Kinase; domain 1 329 436 - -
Spst3g00642 483 Pfam Protein kinase domain 365 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00642 483 FunFam pollen receptor-like kinase 1 331 436 - -
Spst3g00642 483 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00642 Spst-Chr3 9936697 9938148 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00642 25 449 Receptor kinase-like Gene Family AT1G48480 62.818 8.19e-177 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Spst3g00642 Pkinase 3.5e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00642 - - gmx:100818955 669.848