Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00636 ATGGAGTTCGGCTTCTTCCGAGGCTTACCTCACAACATATTCCTCCTCGACATCGCGGGGCAATTGGCGTTCCTGATCGACATCGTCCTCCACTTCTTCCTGGGCTATCACCAAGTTCACTCCAACTCCCTCTCCTTGGTCCTCGACCACTACCAAATCGCCATGAGGTACCTCAAGTCTCGCTTCCTCTTCGATCTTCTCGCCTGTTTCCCCTGGGACTACATCTACAAGCTCACCCACAACAACGAGATCGTTCGCTATATGCTTTGGATTAGACTCACTCGTGCTTCCAGAGTCACCCAATTCTTCGACACCCTCGAGAAGGATACTCGTATCAATTACTTGTTCACCAGAATCGTCAAACTCTTCGTTGTTGAACTTTACTGCACTCACACCGCTGCATGCATTTTTTACTATCTTGCCACCACTCTGCCCCCTTCCCAGGAGGGTTACACTTGGATCGGTAGCTTGAAAATGGGTGACTATGAATATTCTGACTTCAGACACATCAATCTCTGGAACCGTTATGTCACCTCCCTCTACTTTGCAATCGTTACCATGGCCACCGTCGGCTACGGAGATATCCATGCGGTCAATGTTCGGGAGATGATATTCGTCATGATTTATGTCTCCTTTGACATGATTCTTGGCGCGTACCTTCTCGGTAACATGACTGCGTTGATTGTCAAAGGGTCTAAGACAGAGAAATTCAGAGATCAAATGTCTGATATCATGAAGTACGTGAATAAGAACAAATTAGACAGCCAGATATGTCGTCAAATTAAAGATCATTTGAGGTTAAAGTATGATCCAAGTTACTCGGGATCTTCTTTTCTTCAGGAGATACCAACCACCATTCGTACAAAGATTTCAATAAGCTTGTACGAACAGTTCATTCAGAAAGTTTCTGTTTTCAAGGGATGTTCTTCAGGGTTTATAAAGCAGATCGCAACCAAAGTCAATGAAGAGTTTTTCCTCCCAGGAGAATTAGTAACGGAGCTAGGAGATGTAGCAGATAAACTCTACTTTGTATATCATGGTGAGCTGCGTGAGAAAAGGGGGGAAGACGGTTATACAGAAGAAGAGACAATCACATTGCACACCTATAGTTTCTTCGGCCATATTTCTTTTTTTTGCAATATACCTCAAAATTCTACTGTTGAAGCTCATGAATTTTGCAAGGTTTTGCGACTTGATAAAAAATCCTTCTCTGAAATACTCAAGATATACTTTCTAGACGGTCGTGTTGTCTTGAACAATCTCCTTGAGGTAAGAGACTTAAATCTCCAGCGTAAGCTTTTGTTATCAGACTTCAACCTCACTGTTCGAAACATGGAAACAGAGCTTGCTACAAAACTCAACTGTGCTGCCCATGATGGTCATCTTGATCTTGTCAAACGTTTCATTGGATTTGGGGCAGATCCCAGGAAAACTGATTATGATGGTCGAACACCCTTGCATATCTCAGCATCAAAAGGATATGTGGATATTTCTTCCTATCTTGTTGAACAAGGAGTAAACATCAATGCTGCAGATAAATTTGGCACCACTCCCTTGCTTGAAGCCATCAAGAATGGACATGAAGAAGTAGCATCTGTACTTGTTAACGCGGGAGCTATCCTTACCATTGATGACGTTGGCAATTTTCTCTGCATGACAGTTGCAAAGAAGGAGTTTGACCTTTTAAAAAGGGTTCTAGCTTGTGGTGTTAATCCGAATGCCAGAAATTATGATCAACGTACCCCTCTTCACATTGCTGCCTCTGAAGGTTTCTTTACAATGGTTGAATTACTTCTAGAAGCAGGAGCAAGTGTTTTATCTAAGGACAGATGGGGAAATACACCTCTTCATGAAGCTCATACTGGTGGAAATAGAAATATGATCAAAATGCTTGAAGTTGCAAAAGTTTCTCAGTTGGCAGAGTTGTCCTATGATATTCATGAAACTCCAGCAACACCAATGTTGCAGTCAACAAATGAAATTCCAAAAAGGAGATGTATAGTGTATCCTTTCCACCCATGGGATCACAAAGCGGATAAAAAAGAGGGAGTGGTGCTATGGGTTCCACAGAGCATTGAAGAGCTTATGAAGGAAGCTGGGAAACATTTGGAAACTACAAACAATTCCTATATTTTGTCAGAACAAGGTGGAAAAATTCTTTACGTAGACATGATTAACAACGATGAGAAGCTATTTCTAGTGAATGAAGCTCAAATAGATCCTGTGTCATGTATATTGGCCAATAATGGCCAACCTCAATCTCATTCTTCCAACAAATTAGGACTAGCTCTCTCTTTGAAAGCTGAACTTTGA 2313 0.4185 MEFGFFRGLPHNIFLLDIAGQLAFLIDIVLHFFLGYHQVHSNSLSLVLDHYQIAMRYLKSRFLFDLLACFPWDYIYKLTHNNEIVRYMLWIRLTRASRVTQFFDTLEKDTRINYLFTRIVKLFVVELYCTHTAACIFYYLATTLPPSQEGYTWIGSLKMGDYEYSDFRHINLWNRYVTSLYFAIVTMATVGYGDIHAVNVREMIFVMIYVSFDMILGAYLLGNMTALIVKGSKTEKFRDQMSDIMKYVNKNKLDSQICRQIKDHLRLKYDPSYSGSSFLQEIPTTIRTKISISLYEQFIQKVSVFKGCSSGFIKQIATKVNEEFFLPGELVTELGDVADKLYFVYHGELREKRGEDGYTEEETITLHTYSFFGHISFFCNIPQNSTVEAHEFCKVLRLDKKSFSEILKIYFLDGRVVLNNLLEVRDLNLQRKLLLSDFNLTVRNMETELATKLNCAAHDGHLDLVKRFIGFGADPRKTDYDGRTPLHISASKGYVDISSYLVEQGVNINAADKFGTTPLLEAIKNGHEEVASVLVNAGAILTIDDVGNFLCMTVAKKEFDLLKRVLACGVNPNARNYDQRTPLHIAASEGFFTMVELLLEAGASVLSKDRWGNTPLHEAHTGGNRNMIKMLEVAKVSQLAELSYDIHETPATPMLQSTNEIPKRRCIVYPFHPWDHKADKKEGVVLWVPQSIEELMKEAGKHLETTNNSYILSEQGGKILYVDMINNDEKLFLVNEAQIDPVSCILANNGQPQSHSSNKLGLALSLKAEL 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00636 770 Gene3D - 545 643 IPR036770 -
Spst3g00636 770 ProSiteProfiles KHA domain profile. 665 751 IPR021789 -
Spst3g00636 770 ProSiteProfiles Ankyrin repeat profile. 578 610 IPR002110 GO:0005515
Spst3g00636 770 PRINTS EAG/ELK/ERG potassium channel family signature 17 27 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst3g00636 770 PRINTS EAG/ELK/ERG potassium channel family signature 128 138 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst3g00636 770 PRINTS EAG/ELK/ERG potassium channel family signature 176 193 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst3g00636 770 PRINTS EAG/ELK/ERG potassium channel family signature 220 229 IPR003938 GO:0005249|GO:0006813|GO:0016020
Spst3g00636 770 Pfam Ion transport protein 14 229 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Spst3g00636 770 PANTHER POTASSIUM CHANNEL AKT1 1 737 IPR045319 GO:0005249|GO:0006813
Spst3g00636 770 Gene3D - 441 544 IPR036770 -
Spst3g00636 770 ProSiteProfiles Ankyrin repeat profile. 514 546 IPR002110 GO:0005515
Spst3g00636 770 Gene3D Jelly Rolls 275 440 IPR014710 -
Spst3g00636 770 SMART cnmp_10 304 422 IPR000595 -
Spst3g00636 770 ProSiteProfiles Ankyrin repeat region circular profile. 514 545 - -
Spst3g00636 770 ProSiteProfiles cAMP/cGMP binding motif profile. 304 407 IPR000595 -
Spst3g00636 770 Pfam KHA, dimerisation domain of potassium ion channel 664 733 IPR021789 -
Spst3g00636 770 SUPERFAMILY Voltage-gated potassium channels 8 229 - -
Spst3g00636 770 CDD CAP_ED 304 418 IPR000595 -
Spst3g00636 770 ProSiteProfiles Ankyrin repeat profile. 481 513 IPR002110 GO:0005515
Spst3g00636 770 PRINTS Ankyrin repeat signature 482 497 IPR002110 GO:0005515
Spst3g00636 770 PRINTS Ankyrin repeat signature 594 608 IPR002110 GO:0005515
Spst3g00636 770 FunFam Potassium channel KAT2 292 428 - -
Spst3g00636 770 Pfam Ankyrin repeats (3 copies) 555 631 IPR002110 GO:0005515
Spst3g00636 770 Pfam Ankyrin repeats (3 copies) 455 543 IPR002110 GO:0005515
Spst3g00636 770 ProSiteProfiles Ankyrin repeat region circular profile. 578 610 - -
Spst3g00636 770 SUPERFAMILY cAMP-binding domain-like 232 422 IPR018490 -
Spst3g00636 770 Pfam Cyclic nucleotide-binding domain 324 408 IPR000595 -
Spst3g00636 770 SMART ANK_2a 578 607 IPR002110 GO:0005515
Spst3g00636 770 SMART ANK_2a 481 510 IPR002110 GO:0005515
Spst3g00636 770 SMART ANK_2a 611 640 IPR002110 GO:0005515
Spst3g00636 770 SMART ANK_2a 514 543 IPR002110 GO:0005515
Spst3g00636 770 SMART ANK_2a 448 477 IPR002110 GO:0005515
Spst3g00636 770 SUPERFAMILY Ankyrin repeat 403 631 IPR036770 -
Spst3g00636 770 ProSiteProfiles Ankyrin repeat region circular profile. 481 513 - -
Spst3g00636 770 Gene3D - 3 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00636 Spst-Chr3 9908183 9912700 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00636 556 631 Ion Channels AT5G37500 29.592 7.69e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00636 K21867 - gmx:100798698 1226.08