Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00626 ATGGCGGACACAAACACAAGCTCTGTTGATGTGATTTTGGACTTCCTTAGGAGGAACCGGTTCACCAGAGCCGAAGCAGCTTTGCGCAGTGAGATCAATAATCGCCCTGACTTGAATGGCTTCCTTCAGAAGCTCACATTGGAAGAAAAAGCCCCACGTGATGTGCCTCAAAATAATAAGGGGAAGCCCGTGCTTGAGATTCAAGGGGTGGACCCTCTTGAATTTTCCAATGAACTGATTGTCAAGGAAATAGAGTGTGGGAATGGTCCAAATGCCACCGAAAGCAAATGGAAAACTGCTGCTCCCACTTTGGTGGAACGGAATAAATTGGATGAAGCAGTTGGAACTAGTGATAAGAACTTCATTTTCTCTAAGACTTCAGAGGATGGTCTGCTTGATTTATACTCCTGGAAGTTCAACCCTGGCAAAGCTCCTGTGGAGCCTTACCAAAACGATGCTGGTAGTAGGGCTAATAATACTTCGAAGGCCACTATATCTCAACAATCAAAATGTCAAACTAATGAAGCTGTGGATCTAAGTGTTGCCAATACCAGTTCAAAGTCTGGGGAGGAAAATGCTGCCCTTGCTGACAAAAAATCACTGTGGTCTGGAAGTAGTAGTAAAGCCTCTGTGGATCTTAAGTACGACCTTGTGCAAAGCAAAGAACCTATGGAACTTGATCGGCAACTTAAATTCAATAGTTCATCCCTTAAAGTGAACTTTTCAGATAATCCCTGGTCAAGAACGGACCAGAGTGTGAATTCGTCTTCAGACTCCTACAAAGATTGTTCTGTCAAGACTGTCTTTCCCTTCTCGAAAGGGGATGTGTCTACAAGCTTTGATGGTGCCACTTATTCTGACAAAAAAGAGGAGAAAAAAAGGGTAGAAATTAGTGATACCTGGACTTCTATAAAAGAGCAGGTGGATGAGTCAGGGAGGTCTATTTATTTGGTCAAAACACCAGTGAGTTCTGAACAGAAGTTGATTGGCAGCTTAAGTTTTCCTCTTCCACCTGAAAATCAGAAGGAAGAGTTTCCTAGGCTTCCTCCAGTTAAACTCAAGTCAGATGATAAGCCCTTGGTTGTTAATTGGGAAGAGAAGTTTGAACGAGATGGACCAACTTCAAAACCCCCTGGTGCTGACAGCACTTTACTTATTGGTTCTTATCTGGATGTACCTATTGGACAAGAAATTAATCCTCCAGGTATGAGGAGAGCTACAGGGGGCAGTTGGTTATCTGTTAGTCAAGGGATAGCAGAGGATACATCTGATCTTGTATCAGGATTTGCTACAGTTGGTGATGGGTTGAGTGAATCCATTGACTATCCAAATGAATATTGGGACTCTGATGAATATGATGATGATGAGGATGTTGGGTACATGAGACAACCTATTGAGGATGAGACCTGGTTTTTGGCTCATGAGATTGATTACCCTAGTGACAATGAAAAAGGGACTGGGCATGGAAGTGTTCCAGATCCTCAGGAAAGAGGTCTAGCCAAAGATGAGGATGATGATCAATCTTTTGCTGAGGAGGATTCTTACTTCTCTGGGGAGCGATATCTTCAGGAAAATAATGTTGAACCAGTGACAGGTACTGATGATCCTATTGGTCTAACAGTTACTGAGTATGGAAGGACTAATGATAATGATTTAATGGCTCAATATGATGGACAATTGATGGATGAAGAAGAACTGAACCTGATGTGTGCAGAACCAGTCTGGCGGGGCTTTGTCCCTCAAACTAATGAACTCATCATGCTAGGAGATGGGAGGGTGTTGAATGATAACGTAAGATCACGGCTAGAGAACATCAGTATGGATGATGATCAACATGGTTCAGTTAGGTCAATTGGTGTAGGGATCAACAGTGATGCTGCAGATATTGGTAGTGAAGTGCGGGAGAGTTTGGTTGGTGGTAGTAGTGAAGGAGATTTAGAATATTTCCGTGATCCTGATGCCGGGCTTGGTGGTTCCAGGCACTCTCATCTAGATTTGGATAAGAAATCTACTAACAAATCAAATAAAAATCAGAACAATGACAAGGGTGAGTCAAATAAATATGTTATTGGATGTGACAGAGATGCACAGTTCCAGTTAAAAACTCATGGTGATGGGAACTTCTCATTTCCCCTTTCTTTGAAGGATGGTGAGATGATTCAGGCTTCCACCAATAGGTCCCTATGGTCAAATAACGGCAATGCAGATGAAACTGATGACTCTCTTAGTGCATTTGTGGAAACTGATGACATGCTTGCTTTGTGGAGGCGAAAGAGCAGTGATTCATCACCTGTAAAAAGTTCTAGGGATGATAATAATGTCAACAATGTAAGATCCACAAACTCATCTCCAACAACATTATCAAATTATGGATATTCCGAAAGAGAGCATGTGAAGGTAGAAGAGGATGAAAAAGCTGGAATTGCAAGGGAAGATGATCTAAGAGCATCCCAGGAGGATGAAGAGGTAGCTGCTGTGCAAGAGCAAGTTAGGCAGATAAAGGCACAGGAGGAGGAATTTGAAACCTTCAATCTAAAGATTGTGCACAGGAAAAACAGGCATGTTCTTAGCACATATTTGATCTTAATGAGCTTGATAGCTTGGGTGATTTTTGTTATGCAAACTGGCTTTGAGGAGGACAAGAATTTCCCTGTTGTTTTAAATTCTGTAATAGCTGGAAGGTATCATGTCACCGAGTATCTGGGATCTGCTGCATTTAGCAAAGCTATACAAGCTCATGACCTACATACCGGCATGGATGTTTGTGTTAAAATTATAAAGAACAACAAGGACTTTTTTGACCAAAGTCTTGATGAGATCAAGCTTCTCAAGTATGTCAATAAACATGATCCTGGAGACAAGTATCACATTCTTCGATTATATGATTATTTCTATTATCGAGAACATTTGTTAATAGTATGTGAACTACTTAAAGCAAACTTGTACGAGTTTCATAAATTTAATAGAGAATCAGGTGGTGAAGTGTACTTTACAATGCCAAGATTACAGTCAATTACCATTCAGTGTCTGGAAGCACTTCAATTTTTGCATAGCCTTGGACTAATACACTGCGACTTGAAACCAGAGAATATTTTGGTTAAGAGCTATAGTAGATGTGAGGTGAAGGTCATTGATCTTGGAAGTAGTTGTTTCGAGACAGATCATCTTTGCTCATATGTTCAGTCCAGATCTTACCGTGCTCCTGAGGTTATTTTGGGACTTCCATATGATAAGAAAATTGATATCTGGTCTCTGGGCTGCATCTTGGCAGAACTTTGTACCGGCAATGTCCTCTTCCAAAATGATTCGCCTGCGACATTACTTGCTAGAGTGATTGGGATCATTGGTCCAATTGATCAAGGTATGCTTGCAAAAGGACGGGATACCTATAAGTACTTCACCAAAAATCATATGCTTTATGAAAGAAATCAGGAAACCAACAGGTTAGAATACTTGATTCCAAAAAAGACATCCTTGAGGCATAGATTGCCAATGGGAGACCAAGGCTTCATTGACTTTGTGGCTCACTTGCTTGAAGTCAACCCTAAGAAGCGGCCCTCTGCATCTGAAGCTCTGAAGCATCCATGGCTATCATACCCTTATGAACCCATATCATCTTGA 3621 0.4131 MADTNTSSVDVILDFLRRNRFTRAEAALRSEINNRPDLNGFLQKLTLEEKAPRDVPQNNKGKPVLEIQGVDPLEFSNELIVKEIECGNGPNATESKWKTAAPTLVERNKLDEAVGTSDKNFIFSKTSEDGLLDLYSWKFNPGKAPVEPYQNDAGSRANNTSKATISQQSKCQTNEAVDLSVANTSSKSGEENAALADKKSLWSGSSSKASVDLKYDLVQSKEPMELDRQLKFNSSSLKVNFSDNPWSRTDQSVNSSSDSYKDCSVKTVFPFSKGDVSTSFDGATYSDKKEEKKRVEISDTWTSIKEQVDESGRSIYLVKTPVSSEQKLIGSLSFPLPPENQKEEFPRLPPVKLKSDDKPLVVNWEEKFERDGPTSKPPGADSTLLIGSYLDVPIGQEINPPGMRRATGGSWLSVSQGIAEDTSDLVSGFATVGDGLSESIDYPNEYWDSDEYDDDEDVGYMRQPIEDETWFLAHEIDYPSDNEKGTGHGSVPDPQERGLAKDEDDDQSFAEEDSYFSGERYLQENNVEPVTGTDDPIGLTVTEYGRTNDNDLMAQYDGQLMDEEELNLMCAEPVWRGFVPQTNELIMLGDGRVLNDNVRSRLENISMDDDQHGSVRSIGVGINSDAADIGSEVRESLVGGSSEGDLEYFRDPDAGLGGSRHSHLDLDKKSTNKSNKNQNNDKGESNKYVIGCDRDAQFQLKTHGDGNFSFPLSLKDGEMIQASTNRSLWSNNGNADETDDSLSAFVETDDMLALWRRKSSDSSPVKSSRDDNNVNNVRSTNSSPTTLSNYGYSEREHVKVEEDEKAGIAREDDLRASQEDEEVAAVQEQVRQIKAQEEEFETFNLKIVHRKNRHVLSTYLILMSLIAWVIFVMQTGFEEDKNFPVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIDQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEVNPKKRPSASEALKHPWLSYPYEPISS 1206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00626 1206 FunFam Putative serine/threonine-protein kinase dyrk2 889 976 - -
Spst3g00626 1206 MobiDBLite consensus disorder prediction 636 687 - -
Spst3g00626 1206 MobiDBLite consensus disorder prediction 757 794 - -
Spst3g00626 1206 Pfam Protein kinase domain 895 1197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00626 1206 Gene3D Phosphorylase Kinase; domain 1 889 976 - -
Spst3g00626 1206 MobiDBLite consensus disorder prediction 478 508 - -
Spst3g00626 1206 PANTHER DUAL SPECIFICITY PROTEIN KINASE 410 1197 - -
Spst3g00626 1206 Gene3D Transferase(Phosphotransferase) domain 1 949 1197 - -
Spst3g00626 1206 ProSiteProfiles Protein kinase domain profile. 895 1197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00626 1206 CDD PKc_DYRK_like 895 1197 - -
Spst3g00626 1206 MobiDBLite consensus disorder prediction 152 169 - -
Spst3g00626 1206 FunFam Serine/threonine-protein kinase ppk15 974 1198 - -
Spst3g00626 1206 MobiDBLite consensus disorder prediction 766 792 - -
Spst3g00626 1206 SMART serkin_6 895 1197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00626 1206 MobiDBLite consensus disorder prediction 646 675 - -
Spst3g00626 1206 SUPERFAMILY Protein kinase-like (PK-like) 883 1199 IPR011009 -
Spst3g00626 1206 Coils Coil 816 846 - -
Spst3g00626 1206 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1021 1033 IPR008271 GO:0004672|GO:0006468
Spst3g00626 1206 MobiDBLite consensus disorder prediction 146 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00626 Spst-Chr3 9832405 9842166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00626 894 1192 MAP Kinase Gene Family AT5G19010 31.034 4.04e-29 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Spst3g00626 Pkinase 2.3e-51 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04431 3 95846414 95850987 Spst3g00626 3 9832405 9842166 ECH
Spst3g00626 3 9832405 9842166 Spst3g00626 3 9832405 9842166 ECH
Spst3g00626 3 9832405 9842166 Spst4g02900 4 68658806 68664267 PCT