Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00624 ATGGCCAAGAGATCAGATTTTGCACAGAAGCTGCTCGATGATCTCCGCCTAAGGAAAGAGCGAATGGCTTCGTCTCACACCTCTAATCAATCCCACCATTTTTCTATTGATGCATATGCTTACACAAAGCAAACATACAGAGGATCCAGAAATACAAAAGCTAATGAAATTGTGAGTTCCAGAACTGGGGTGACGCTTAATAGTTCTAGTAGAAGCCATAGATCAGTAAACAATGGGCAAGTTTCAAATCAGATGGTTCCATATGGGAAAGGTCAGAGCTCAAGGCAAACTGGTGATATATCCCTGGCCCTGGCTTTTGCCTTTGAGAATGGAGGGAAACTAAAAAGAAATGATTCAATTATGGGTTTCCTTCACCAAATTAAAAGAGGAACTTTGGAATTCAGCATGTCAGAAAGACAATTAGCTTCAACTAGCAACTATCCTAAGCAAGTAAACGAGATATCCAAAGGTGCACACAAACTAAATCAGATACTGAGAGCCTGCTCCAATGGTCTTAACATGGAAACATATTCGATACAATTTGCAAAGGAACTATTGCAAGGAGCTATTGATTTGGAAGAGTCCCTCAGGATGCTAGTAGACCTGCAAAATAATTCACAGTTTATGATTACCTCGCAAAAGAAAAATCGAATCACACTATTAGAGGAAGATAACGACGATGATGATGACACAGGCATGGAAATGCAACTGGCAAGACCAACTTTCTCTTTTGACAAACATACTACTCAGAATATACAACAACTTGGAAAGACTATTTTAATGCAGGGGCCAGTTACTCTTACCAGCTCTAAGGAAGGCAGAAACTCAAATAATGAGAACAAAACCGTGAAGAGACAAGTTTCTCGGAAGAGATCAACTAAAACTAGCTCTATCTCTACCTCTGGCATTAAGAATGTCAATGCTAGTTCAGAAGGGAAAAACCAGACGGCCTCCAACCCAGAGAAGGGTAGGATTCCAAATGTAATAGCCAAATTAATGGGGCTGGACATCCTTCCTGACAAAGTGGAAATGCAATCAAAACACGTGATGCTACAGAAAAGGGAAGGAATATCACCCAAGCATACTGCCAAAGGAAATACTAAGAAGATTGAACTGCAGAGCAAAGAAACAGATAATTTGGTTCCTCTAAAAAACCAAAAAGTGATTGAAGCCTTCAAAACGCCTGCAATTCAGGGTGAAGAGATGATATCTGGGACAAATAAAAACTTGCTTGTAGAAAAAACCAGCTCTGAGTTGTCTCTTCAGAATGGAAAACCACCGTGGAGAGACCTGGATGGAACAAAAGCACTGAAAGGATTTGACAAGCCCAGCATAAAAGTTGACAAGCAGACTAAAAGTTCCGCTGAAAAGAATCTTACTAGAGAAAGTCAAAAGGATGCTCAGGAGATAGAAAGAAAGAAGGATCACCCCAATAACAGTGACAGGGAGCAGAAAGGCACTGTAAAGGGCAGAACCAATGACCCAGTTCCGAACAACATGCTATCCCAGATGGAACAAGTGGATGAAAGATCAGAAGCTAAGTCCTCGATTCAGGAAGACAAGGATGTCAATGCAAATATTCTTCAGCCTGAAAAAAGACACACAAACAAGAACATCATGAACAATGAAAGGAAGTCTCGGAACAACGTTGGAATACCAAAGTCACACGTACTCTCCAAAAATGGTCCTCATGAAGAAAAACATCGCAGAGAACAACAACTCCAGGTGAGGGACGAACAACTGTTAATGATGAGACCACAAGGAGGGAATGAAATGACATCAAAGAATTCACCAAAATCTCCTCTTCCTCAGAAGAAACAGCTATCCATGAACCAGGCCACACTGTTTAAGAAAATCGTTGGAGAAAAAAATGTTGCTGCTATGAAATCGGAAGGCCTTTTAACTAATCATTATGATCTAGTCAGATATGAAGCATCCAATCATCCAAAGAACAAAGTAAAAGAAATTGTACATAGGAAGTCAGGCCAAATTTGCTCTCCAAGAGATCAAGAATATGAACGAGCTAAGAGAAGTGGCATTAGAACTTTGATGGATGAAAAACACGTCTATAAACTGGCAAGCAAGAAAATAAAGAATTCCAGAAAGCAAAGTGTTGATGTGCCCGGAAAGATTGATCGAGTGTTGACTGGAAGAAATGGAGCCAAGCTCATCTCTAAACAAGGAAAACAGCAGATTCCCATTGCTGACAAATTTGAAGTTTTGAATGAAGCTGAACAAGAAACGATTCGCTTGGTCAGAGAAACAGATGCACAAATCATTAGCCCCAATGAACCAGTATATGTGGATTCGACTGAACCATTGGATGTGAGGCGCCAACCCCATAAGGAAGCTGAACTACCTCCTACATTGTCCAGTTCTGTTGGCGGAGAACTTCAAAGCCAACAAGATTTGGTAGCATTAGTTCCCAATGATTTGCATTGCCAAGCTGTGTTATCATCGCCAGATCCTGTTGCAGCAGATGAAGGATTCGTGACTGGTGAGGTTGCATTACAGAAAACAAATGGAATTCAGGAAGACAGATTGCGTGTTAAGCACTCAAACCTAGAAGGTCGGAATATTTCTGAAAAAAGCTTCCAACAGCCACTAACAGAAAGTGAAAACTGCCTCAAGTGGATACTGGTCATGAGTCAACTATTCGTCAACACTGCAGAAGCACTTTTCAAACTGAACATCCCGTTTAACGTTCTTCAAGGTGGTGGTCGGGAGATTCAAGACCAAGCCAGCAAACTCATATTAGACTGTGGGTATGAAGTGATGAAAAGAAAGGGGATACGGCAGGAACTCAAAGTACATAGTTATTCAACTATATCAATGGGTACCGCCAACATAATAACCTTTGATGACTTAGTTAGGCAGCTGAATGAAGACATGGAGAAGCTCAAATTCTACAGTAGGAAAAAAAGTTATCAAGTTGTTGAGGAGGACTACCTTTCTAAAATGCTTGAACATGATGTTTATGACAAAGATCCAGACATGAACTGCATGTGGGATTTAGGTTGGAATGATGAGACACTTGCATTTATCGAGAAATACGATGTTATAAGGGATACAGAAAAGCATATACTTAGTGTTCTACTGGATGAGATCACCCTGGATTTTTACATGTTCAATCAGACACCGAAACAGTAG 3150 0.4051 MAKRSDFAQKLLDDLRLRKERMASSHTSNQSHHFSIDAYAYTKQTYRGSRNTKANEIVSSRTGVTLNSSSRSHRSVNNGQVSNQMVPYGKGQSSRQTGDISLALAFAFENGGKLKRNDSIMGFLHQIKRGTLEFSMSERQLASTSNYPKQVNEISKGAHKLNQILRACSNGLNMETYSIQFAKELLQGAIDLEESLRMLVDLQNNSQFMITSQKKNRITLLEEDNDDDDDTGMEMQLARPTFSFDKHTTQNIQQLGKTILMQGPVTLTSSKEGRNSNNENKTVKRQVSRKRSTKTSSISTSGIKNVNASSEGKNQTASNPEKGRIPNVIAKLMGLDILPDKVEMQSKHVMLQKREGISPKHTAKGNTKKIELQSKETDNLVPLKNQKVIEAFKTPAIQGEEMISGTNKNLLVEKTSSELSLQNGKPPWRDLDGTKALKGFDKPSIKVDKQTKSSAEKNLTRESQKDAQEIERKKDHPNNSDREQKGTVKGRTNDPVPNNMLSQMEQVDERSEAKSSIQEDKDVNANILQPEKRHTNKNIMNNERKSRNNVGIPKSHVLSKNGPHEEKHRREQQLQVRDEQLLMMRPQGGNEMTSKNSPKSPLPQKKQLSMNQATLFKKIVGEKNVAAMKSEGLLTNHYDLVRYEASNHPKNKVKEIVHRKSGQICSPRDQEYERAKRSGIRTLMDEKHVYKLASKKIKNSRKQSVDVPGKIDRVLTGRNGAKLISKQGKQQIPIADKFEVLNEAEQETIRLVRETDAQIISPNEPVYVDSTEPLDVRRQPHKEAELPPTLSSSVGGELQSQQDLVALVPNDLHCQAVLSSPDPVAADEGFVTGEVALQKTNGIQEDRLRVKHSNLEGRNISEKSFQQPLTESENCLKWILVMSQLFVNTAEALFKLNIPFNVLQGGGREIQDQASKLILDCGYEVMKRKGIRQELKVHSYSTISMGTANIITFDDLVRQLNEDMEKLKFYSRKKSYQVVEEDYLSKMLEHDVYDKDPDMNCMWDLGWNDETLAFIEKYDVIRDTEKHILSVLLDEITLDFYMFNQTPKQ 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00624 1049 MobiDBLite consensus disorder prediction 431 489 - -
Spst3g00624 1049 MobiDBLite consensus disorder prediction 559 576 - -
Spst3g00624 1049 MobiDBLite consensus disorder prediction 417 607 - -
Spst3g00624 1049 Pfam DUF761-associated sequence motif 324 341 IPR032795 -
Spst3g00624 1049 MobiDBLite consensus disorder prediction 292 322 - -
Spst3g00624 1049 MobiDBLite consensus disorder prediction 63 92 - -
Spst3g00624 1049 MobiDBLite consensus disorder prediction 267 325 - -
Spst3g00624 1049 PANTHER OS01G0228800 PROTEIN-RELATED 8 1041 - -
Spst3g00624 1049 MobiDBLite consensus disorder prediction 491 506 - -
Spst3g00624 1049 MobiDBLite consensus disorder prediction 587 607 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00624 1 387 TRM (TON1 Recruiting Motif) Superfamily AT5G42710 36.160 5.02e-48 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00624 - - pvu:PHAVU_002G333000g 1662.51