Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00568 ATGTTTTTCTTCACTGTCTTCCTTGTCTGCCTTTCACTTGCATTCATCATCATCAAATGGTATTCCAATGCAGCAAACACCCATAACTCACCCCCCTCACCTACAAGGTTACCTCTCCTGGGAAATCTCCACCAACTTGGTTCTTTCCCACACCACAGACTCCAAACTTTGGCTCAAAACTATGGGCCTCTGATGGTGCTCCATTTCGGGAAGGTACCAGTGCTTGTGGTCTCATCTGCTGATGCAGCACGTGAGGTGATGAAAACTCATGACCTGGTCTTCTCAGACAGGCCAAAACGTAAGATGAACGAGGTTCTCTTGTACGGTTCCAATGACCTGGCAAGTTCTAAGTACGGAGAATACTGGAGGCAAATAAGGAGTGTGAGTGTGTTGCACCTTCTAAGTACCAAAAGGGTTCAGTCCTTTCGCTCTGTAAGAGAGGAGGAAACTGCTAGAATGATGGAAAACATTAGGGAGTGTTGTTGTGATTCATTTCATTTGAATTTGACTGACATGTGTGCTGCAGTTACAAATGATGTGACCTGTAGAGTGACTCTGGGAAGGAGGTACTGTGGGGAAGAAGGGAGGAAGTTTCAGAAGATGTTTTTGGAGTTTGGGGAGTGTTTGGGTGCTGTGTCTATAGGGGACTATGTACCTTGGCCATTGGATGAAGTGATTGAGGAGCATGCTAGGAATGGAAGAGATGGGGGTGTTGATGTTGATAGTGAGGACCAGAGTGATTTTGTGGATGTTTTGCTTTCGATAGAAAAAAATAACACCTCCGATTCCCTGATTAATAGAACTGCAGTAAAGGCTTTGATACTGGACATGTTTGTTGCGGGTACTGACACTACTTTCACAGCCTTGGAGTGGATAATGTCTGAATTGTTAAAGCACTCAAGTGTGATGCATAGATTGCAAGACGAGGTGAGAAGTGTGGTTGGTAACAGGACTCATGTAACTGAGGATGATTTAGGTGAAATGAAGTACTTGAAGGCTGTAATCAAAGAGAGTCTTCGGCTTCATCCCCCACTTCCCTTATTAGTCCCCAGGAAATGCATGGAAGATGTCAAAGTGAAAGGTTATGACATTGGAGCTGGAACTCAGGTATTGGTGAATGCATGGGCCATTGGAAGAGACCCTTCATGTTGGGACCAACCTCTTGAGTTTAAACCAGAAAGGTTCCTCAGCAGTTCCATAGACTTCAAAGGACATGATTTTGAGCTTATTCCATTTGGTGCAGGAAGAAGGGGTTGCCCTGGAGTAACATTTGCCACAGCAATAGTTGAGATGGTAATAGCAAACCTTGTCCACCAATTTGATTGGTCATTGCCTGGAGGGGCATCTGGGGAGGACTTGGACATGTCTGAAACCACTGGCCTTGCTGTTCATAGAAAATCTCCTCTTCTAGCAGTAGCAACTGCATATCAGAGAAATTAG 1440 0.4479 MFFFTVFLVCLSLAFIIIKWYSNAANTHNSPPSPTRLPLLGNLHQLGSFPHHRLQTLAQNYGPLMVLHFGKVPVLVVSSADAAREVMKTHDLVFSDRPKRKMNEVLLYGSNDLASSKYGEYWRQIRSVSVLHLLSTKRVQSFRSVREEETARMMENIRECCCDSFHLNLTDMCAAVTNDVTCRVTLGRRYCGEEGRKFQKMFLEFGECLGAVSIGDYVPWPLDEVIEEHARNGRDGGVDVDSEDQSDFVDVLLSIEKNNTSDSLINRTAVKALILDMFVAGTDTTFTALEWIMSELLKHSSVMHRLQDEVRSVVGNRTHVTEDDLGEMKYLKAVIKESLRLHPPLPLLVPRKCMEDVKVKGYDIGAGTQVLVNAWAIGRDPSCWDQPLEFKPERFLSSSIDFKGHDFELIPFGAGRRGCPGVTFATAIVEMVIANLVHQFDWSLPGGASGEDLDMSETTGLAVHRKSPLLAVATAYQRN 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00568 479 Gene3D Cytochrome P450 16 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g00568 479 SUPERFAMILY Cytochrome P450 31 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g00568 479 Pfam Cytochrome P450 31 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g00568 479 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
Spst3g00568 479 PANTHER CYTOCHROME P450 71B11-RELATED 13 474 - -
Spst3g00568 479 CDD CYP71-like 61 469 - -
Spst3g00568 479 PRINTS P450 superfamily signature 333 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g00568 479 PRINTS P450 superfamily signature 280 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g00568 479 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g00568 479 FunFam Predicted protein 278 471 - -
Spst3g00568 479 PRINTS E-class P450 group I signature 269 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g00568 479 PRINTS E-class P450 group I signature 373 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g00568 479 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g00568 479 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g00568 479 PRINTS E-class P450 group I signature 332 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g00568 479 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g00568 479 PRINTS E-class P450 group I signature 289 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g00568 479 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00568 Spst-Chr3 9228792 9230699 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00568 1 476 Cytochrome P450 AT3G48280 47.581 5.22e-167 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00568 - - gmx:100819183 803.512