Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00558 ATGCTTCAACCGATTCATTGTAATACCAATGGCTTATCGGCGATGCCTTTTGATAAGAGGGAACCTTGTAGATCGGAGGGTTCAGAGAACATTGATAGTAGCATAATCACTGATGTAGCTGATGTCCTTACTGATGCTACCATAGACACTGTAGCTTCTCAGGCTGCCACCGTTAATGAAGTTGCAATTGCTGCCGCTGATTCTTTTTTGCCTGTAATGGGGTTGCAGTACGTAATAGATGCTATACATTCCTATACTGGCCTAAATTGGTGGGCATCAATAGTTCTTACAACCTTGTTGATTCGAAGTGCTACAGTTCCACTCTTAATAAATCAACTTAAGGCCACCGCTAAACTTAGGTTAATGAGGCCTCGCTTGGAGGAGATAAAGCAACAGATGGATAGGATGGCTATGGATCCCGTTGCTGTTGCTAAAGGTCAGGCGCAGATGAAGAAGCTATTTAAGGAATATGGTGTGAGCCCTTTTACGCCATTAAAGGGACTCTTTGTTCAAGGCCCTATTTTTGTTAGTTTTTTTCTTGCGATATTAAACATGGCTGAAAAAGTGCCATCATTCAAGCATGGTGGAGCTTTTTGGTTTACTGATCTCTCTACTCCAGATGCCTTGTACATTTTTCCAGTTTTGTCTGCATTGTCATTCTTAATGACTGTAGAGTGTCATATGCAAGAGACGGAAGGAATTTGGACCATGAAAAATGTCTACAGGGGTTTTGCGATTCTTACAGTTCCTTTCTCCATCGGATTTCCTAAGGCAATATTCTGCTACTGGGTTACATCAAGTTTGTTTTCAGTTGTATATGGACTTGCGCTTAAAGCTCCTGGAGTAAAGAAAATGTTGGACATTCCGAGAGGTGTCAAAAGGACAACTTCGTCTGAAGCAAAGAAGACCTGA 912 0.4167 MLQPIHCNTNGLSAMPFDKREPCRSEGSENIDSSIITDVADVLTDATIDTVASQAATVNEVAIAAADSFLPVMGLQYVIDAIHSYTGLNWWASIVLTTLLIRSATVPLLINQLKATAKLRLMRPRLEEIKQQMDRMAMDPVAVAKGQAQMKKLFKEYGVSPFTPLKGLFVQGPIFVSFFLAILNMAEKVPSFKHGGAFWFTDLSTPDALYIFPVLSALSFLMTVECHMQETEGIWTMKNVYRGFAILTVPFSIGFPKAIFCYWVTSSLFSVVYGLALKAPGVKKMLDIPRGVKRTTSSEAKKT 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00558 303 NCBIfam membrane protein insertase YidC 89 272 IPR028055 -
Spst3g00558 303 CDD 5TM_Oxa1-like 87 280 - -
Spst3g00558 303 PANTHER OXA1 44 288 IPR001708 GO:0016020|GO:0032977
Spst3g00558 303 Pfam 60Kd inner membrane protein 90 273 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00558 Spst-Chr3 9134180 9143393 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00558 93 284 Chloroplast and Mitochondria Gene Families AT2G28800 22.927 7.48e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00558 K03217 - gmx:100817052 424.476