LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst3g00557	ATGCCTTTTGATAAGAGGGAACCTTGTAGATCGGAGGGTTCAGAGAACATTGATAGTAGCATAATCACTGATGTAGCTGATGTCCTTACTGATGCTACCATAGACACTGTAGCTTCTCAGGCTGCCACCGTTAATGAAGTTGCAATTGCTGCCGCTGATTCTTTTTTGCCTGTAATGGGGTTGCAGTACGTGATAGATGCTATACATTCCTATACTGGCCTAAATTGGTGGGCATCAATAGTTCTTACAACCTTGTTGATTCGAAGTGCTACAGTTCCACTCTTAATAAATCAACTTAAGGCCACCTCTAAACTTACGTTAATGAGGCCTCGCTTGGAGGAGATAAAGCAACAGATGGATGGGATGGCTATGGATCCCGTTGCTGTTGCTAAAGGTCAGGCGCAGATGAAGAAGCTATTTAATGAATATGGTGTGAGCCCTTTTACGCCATTGAAGGGACTCTTTATTCAAGGCCCTATTTTTGTTAGTTTTTTTCTTGCGATATCAAACATGGCTGAAAAAGTGCCATCATTCAAGCATGGTGGAGCTTTTTGGTTTACTGATCTCTCTACTCCAGATGCCTTGTACGTTTTTCCAGTTTTGACTGCATTGTCATTCTTAGTAACAGTAGAGTGTAATATGCAAGAGGGGATGGAAGGAAATCCTGTGGCTGGCACCATGAAAAATCTCTCCAGGGGTCTTGCGGTTCTTACAGTTCCATTCACCATGGGATTTCCGAAGGCAATATTCTGCTACTGGGTTACATCAAATTTGTTTTCACTTGTATATGGACTTGGTAGGCTAGAATGTATAGTGCATGTATTTGAAGACTCCTTGGCTCCCCATAATCTTCGTATTCTTTTCGATATTCTTTTCCACTATGCTGAACTGCAAACGCTTAAAGTCCCTGGTGTAAAGAAAACTTTGGGTATTCCTGAAATACCTGTTGCAGCAGCTCCCACTGGTGCTCCTCAATCGCCCTTTTCTATATTTCCCGCACTAAAACAAACTACGTCTGCCACAAATGGGTCCAGGTCAGTAGTAACAGATGAACCTTCAAAACATTCAAATACAAAGATATCTTCTTCATCGGTTATTAGTCAAAGGCTTAGAAGTTTAGAGAAACAAGTGAAAGGAAGAAAGAAGCACAAGTGA	1155	0.4165	MPFDKREPCRSEGSENIDSSIITDVADVLTDATIDTVASQAATVNEVAIAAADSFLPVMGLQYVIDAIHSYTGLNWWASIVLTTLLIRSATVPLLINQLKATSKLTLMRPRLEEIKQQMDGMAMDPVAVAKGQAQMKKLFNEYGVSPFTPLKGLFIQGPIFVSFFLAISNMAEKVPSFKHGGAFWFTDLSTPDALYVFPVLTALSFLVTVECNMQEGMEGNPVAGTMKNLSRGLAVLTVPFTMGFPKAIFCYWVTSNLFSLVYGLGRLECIVHVFEDSLAPHNLRILFDILFHYAELQTLKVPGVKKTLGIPEIPVAAAPTGAPQSPFSIFPALKQTTSATNGSRSVVTDEPSKHSNTKISSSSVISQRLRSLEKQVKGRKKHK	384

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst3g00557	384	Pfam	60Kd inner membrane protein	76	262	IPR028055	-
	Spst3g00557	384	MobiDBLite	consensus disorder prediction	337	371	-	-
	Spst3g00557	384	PANTHER	OXA1	31	265	IPR001708	GO:0016020\|GO:0032977
	Spst3g00557	384	MobiDBLite	consensus disorder prediction	337	384	-	-
	Spst3g00557	384	CDD	5TM_Oxa1-like	73	265	-	-
	Spst3g00557	384	NCBIfam	membrane protein insertase YidC	75	262	IPR028055	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst3g00557	Spst-Chr3	9108929	9116635	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst3g00557	79	260	Chloroplast and Mitochondria Gene Families	AT2G28800	24.064	1.01e-07	51.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst3g00557	K03217		-	gmx:100817052	536.569