Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00515 ATGCTCACATTTTCCATGGCGGTCACTGGCAACGACAATGACAATGGCATCATCTATATTCATGGTGGTGACCTTGATTTGAAAATCATCAAGGCGCGACAGTTGCCGAACATGGACATCTTCTCGGAGCATCTCCGTCGCTGCGTAACATGTGACACTATCAAATTCCACTTTGACGACGTCTCCGCCCACAGTGGAAGCCAGCGGACGCGCCACAATAGGAGGATCATCACGAGCGGCCCGTACATGACGTTCCACATCCCACTCGCGCATCCAGTTGTGGATTTGGAGTTTCGAGTGAAGGATGACGACGTTTTTGGCGCGCAGACGATGGGAACTGTGAAGATTCTGGCGTGGCTGATTGCTACTGGCCAGTTAATTTTCGACTGGTTTCCTATCATTGGACCGTCCGGGAAGCCGGCGAAGCGAGACACAACGTTGCACATGCAGATGAAATTCATGCCGGTGGAGGAGAATTTGCTTTACCAGCGAGGCATTGCAGCGGATCCGGAGCACTGCGAAGTGAGGAACACGTATTTTTCAGTGAGAAAGGGGAGTTCAGTAAGGTTGTATCAAGAAGCGCAATGTCCCGAATCTGGAAAAGGGAAGTTACCTGAGGTAAAGCTTGAGAATGGAGAGGTTTATAGGCACGGGAAGTGTTGGGAGGGTATTTGTTATGCCATATCTGAGGCTCATCACATGGTGTATTTGGTGGGTTGGTCGATTTACCATAAGACTCATGATGAGGAAACCAAGAAGTTTTTTAAACATTCTTCAGTAATGTGTGTTTTGTCGTCTCGGTATGCCAGCAACAAGATGAGTTTCTTGAAGCAACAGGCAAGTGTTTGGATCATTCAGGGTTTGATTCACTTTGACTCTAGAACAAGTCAACACTACTCAGGGATCATTATACAGTTGTTCCAGAGGATGACCCTTCAGTATGGGTTTCTAGTGAAAATGATCCTGAAAACTGGCATGTTCAGGTTTGACACTGCAAGCTTAGTTCTGAGCAAATCTTATGCTATTCTTTCTTGA 1035 0.4696 MLTFSMAVTGNDNDNGIIYIHGGDLDLKIIKARQLPNMDIFSEHLRRCVTCDTIKFHFDDVSAHSGSQRTRHNRRIITSGPYMTFHIPLAHPVVDLEFRVKDDDVFGAQTMGTVKILAWLIATGQLIFDWFPIIGPSGKPAKRDTTLHMQMKFMPVEENLLYQRGIAADPEHCEVRNTYFSVRKGSSVRLYQEAQCPESGKGKLPEVKLENGEVYRHGKCWEGICYAISEAHHMVYLVGWSIYHKTHDEETKKFFKHSSVMCVLSSRYASNKMSFLKQQASVWIIQGLIHFDSRTSQHYSGIIIQLFQRMTLQYGFLVKMILKTGMFRFDTASLVLSKSYAILS 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00515 344 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 22 158 IPR035892 -
Spst3g00515 344 Pfam C2 domain 23 133 IPR000008 -
Spst3g00515 344 Gene3D C2 domain 21 163 IPR035892 -
Spst3g00515 344 PANTHER PHOSPHOLIPASE D 21 246 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00515 Spst-Chr3 8620351 8621730 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00515 23 279 Phospholipase D Gene Family (Wang group) AT4G35790 45.773 4.30e-87 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00515 K01115 - gmx:100814486 390.963