Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00510 ATGGGTGATGGAGAAGAAATGGCCGGGGCTTCGGGTCTCCGGCGAGTGGTGGAGCTCATCCTTGCCGTGCTCTCTCTCTCGCACTCGATTCGTGTCTTCGCCGGAAAATGGCAACTCATTCGTAACAAGCTGGAGGAGCTTCACGGCGGTTTAGTCGCTGCCGAGAACTGTGACTCCGGCGAGAGCCCGTCGTTTTCGCGGCTGGTGGCGGCGGTGGAGGCCACCGCGACGGAGTGTTACGATCTGTGTCGGCGCTGCGTCGATGTTTCCTACAGCGGGAAGCTTCTGATGCAGAGTGATTTGGACGTGGCGTTCGCGAAGCTCGATGCGCACACGAGGAAGCTCTCTGAGATATACAAAACGGGGATTTTAACAAATGGGTTCGCGCTCGTTGTGTCAAAGCCGAGTCTTGGCGCTTCGAAAGAGGACATGAGGTTCTACGTGAGGGACTTAACGACAAGGATGAAGATTGGAGATTTGGGGATGAAACGACAAGCGTTGCGGAACCTTCTAGAAGTTGTATTGGAGGAGGAGAAGTATGTGAAGGTGATTGTTGACGTGGGAGACGTGGTTCATTTGTTGGTGGGATTTTTGGGTTCTAATGAGGTGGAAATCCAGGAGGAGAGTGCCAAGGTTGTTTCTGTGGTTGCAGGATTTGATTCTTATAAAGGGGTTTTGGTTGGTGCGGGGGTGATTGCTCCTTTGATTAAGGTTCTGGATTGTGGGAGTGATTTGGGGAAGGTTGCGGCTGCGAGGTGTCTGGTGAAGTTGACTGAAAATTCGGACAATGCTTGGTGTGTTTCGGCTCAGGGAGGGGTTAGTGTGTTGTTGAAGATTTGTGGTGCTGCTGATTGTAGCGGTGATTTGGTTGGACCTGCTTGTGGGGTGTTAAGGAATCTCGTCGGTGTTGCGGAGATAAAGAGGTTTATGGTTGATGAGGGTGTCGTGTTAACTTTCATTAGGCTTGTGAGGTCCAAGGATGAAGCGATTCAGGTGAATTCGATTGGGTTTATTTTGAGTATTGCCTCTGGGGATGAGTTGGTTAGGCAGATGGTGATCAAAGAGGGAGGGATTCGTGCTTTGTTGCGTGTTTTGGATCCTAAGTGGTCTTATTCGTGTAAAACCAGGGAGGTAGCAATGAGGGCTGTCGAGGATTTGTGTTTTTGTTCACCTAGTTCTGTGGGTATTTTGATGAGTTATGGCTTTGTGGATCAGTTGGCATATTATATTCGAAATGGGGAGGTTTCGATTCAGGAATTGGCATTGAAAGTGTCGTTTAGGTTGTGTGGAACATCTGAGGAGGCTAAGAAAGCAATGGGGGATGCAGGGTTTATGGCAGAGTTTGTTAAGTTTCTCAACGCAAAGTCATTTGAGGTTCGAGAAATGGCAGCTGAGGCACTCTCTGGCATGGTTATGGTGCCTCGAAACAGAAAGAGATTCGTGCAGGATGACCATAATATTTCCCTTCTTCTGCAATTGCTTGATCCACAGGAGGGGAATTCTGGTAATAAAAAGTTCTTAATCTCCATATTAATGTCCTTAACGAGTTGCACTAGTGGGAGGAAAAAGATTGTCAGTTCCGGATATGCCAAAAACATAGAAAAACTTGCGGACGCCGAAGTTTCTTCTGATGCCAGAAGACTTGTGAAGAAGCTATCAACAAGCCGGTTCCGCAGTATGTTGAGTGGGATCTGGCACTCGTGA 1704 0.4853 MGDGEEMAGASGLRRVVELILAVLSLSHSIRVFAGKWQLIRNKLEELHGGLVAAENCDSGESPSFSRLVAAVEATATECYDLCRRCVDVSYSGKLLMQSDLDVAFAKLDAHTRKLSEIYKTGILTNGFALVVSKPSLGASKEDMRFYVRDLTTRMKIGDLGMKRQALRNLLEVVLEEEKYVKVIVDVGDVVHLLVGFLGSNEVEIQEESAKVVSVVAGFDSYKGVLVGAGVIAPLIKVLDCGSDLGKVAAARCLVKLTENSDNAWCVSAQGGVSVLLKICGAADCSGDLVGPACGVLRNLVGVAEIKRFMVDEGVVLTFIRLVRSKDEAIQVNSIGFILSIASGDELVRQMVIKEGGIRALLRVLDPKWSYSCKTREVAMRAVEDLCFCSPSSVGILMSYGFVDQLAYYIRNGEVSIQELALKVSFRLCGTSEEAKKAMGDAGFMAEFVKFLNAKSFEVREMAAEALSGMVMVPRNRKRFVQDDHNISLLLQLLDPQEGNSGNKKFLISILMSLTSCTSGRKKIVSSGYAKNIEKLADAEVSSDARRLVKKLSTSRFRSMLSGIWHS 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00510 567 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 9 566 - -
Spst3g00510 567 SMART arm_5 303 343 IPR000225 GO:0005515
Spst3g00510 567 SMART arm_5 176 218 IPR000225 GO:0005515
Spst3g00510 567 SMART arm_5 260 302 IPR000225 GO:0005515
Spst3g00510 567 SMART arm_5 345 388 IPR000225 GO:0005515
Spst3g00510 567 SMART arm_5 219 259 IPR000225 GO:0005515
Spst3g00510 567 SMART arm_5 432 472 IPR000225 GO:0005515
Spst3g00510 567 SUPERFAMILY ARM repeat 153 549 IPR016024 -
Spst3g00510 567 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 271 315 IPR000225 GO:0005515
Spst3g00510 567 Gene3D - 147 556 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00510 Spst-Chr3 8544253 8545956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00510 159 362 U-box Gene Family AT2G23140 24.020 6.69e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00510 - - gmx:100809382 984.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00510 3 8544253 8545956 Spst6g00694 6 6258342 6260030 PCT